RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 NHEJ1Q9H9Q4 299 aaPredicted RBP-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 ANKEF1Q9NU02 776 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 ANO10Q9NW15 660 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 BTRCQ9Y297 605 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 SNX5Q9Y5X3 404 aa-2.92□□□□□ -2.88
RNU6-539P-201ENST00000516665 SETD5Q9C0A6 1442 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 SIGLEC1Q9BZZ2 1709 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 PRRC2CQ9Y520 2896 aaKnown RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 GNRH2O43555 120 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 SPOPO43791 374 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 TIMM17BO60830 172 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 ATP5LO75964 103 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 FGFR1OPO95684 399 aaKnown RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 PDYNP01213 254 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 EPB41P11171 864 aaKnown RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 GGT1P19440 569 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 MMP11P24347 488 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 NUP62P37198 522 aaPredicted RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 SPAM1P38567 509 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 RPL27AP46776 148 aaKnown RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 TMEM258P61165 79 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 GPR107Q5VW38 600 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 ISLR2Q6UXK2 745 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 DLEU7Q6UYE1 221 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 CLYBLQ8N0X4 340 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 ASCC1Q8N9N2 400 aaKnown RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 UBAC2Q8NBM4 344 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 TMEM185AQ8NFB2 350 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 HIST1H2BAQ96A08 127 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 OMDQ99983 421 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 ULBP1Q9BZM6 244 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 API5Q9BZZ5 524 aaKnown RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 HES2Q9Y543 173 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 ANKHD1Q8IWZ3 2542 aaKnown RBP-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 PI4KAP42356 2102 aa-2.93□□□□□ -2.88
RNU6-539P-201ENST00000516665 CELSR3Q9NYQ7 3312 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 ATRQ13535 2644 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 SPAG17Q6Q759 2223 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 TRAV34A0A0B4J273 112 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 A0A0G2JMP0 313 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 A0A0X1KG70 313 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 K7EPK0 472 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 CASC3O15234 703 aaKnown RBP-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 SOX15O60248 233 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 CDK1P06493 297 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 ERCC1P07992 297 aaPredicted RBP-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 IL11P20809 199 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 CALRP27797 417 aaKnown RBP-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 GPX4P36969 197 aaPredicted RBP-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 VHLP40337 213 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 RAD23AP54725 363 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 SLC25A11Q02978 314 aaKnown RBP-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 HSF2Q03933 536 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 DGUOKQ16854 277 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 LINC00303Q3SY05 128 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 MFSD14CQ5VZR4 134 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 FAM173BQ6P4H8 233 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 CCDC80Q76M96 950 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 UNC93AQ86WB7 457 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 TICAM2Q86XR7 235 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 SERPINA12Q8IW75 414 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 LINC00471Q8N535 108 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 TMEM156Q8N614 296 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 OR1M1Q8NGA1 313 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 OR10T2Q8NGX3 314 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 NCLNQ969V3 563 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 MRPL9Q9BYD2 267 aaKnown RBP-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 CHRNA10Q9GZZ6 450 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 DCSTAMPQ9H295 470 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 RBFOX1Q9NWB1 397 aaKnown RBP-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 GNG12Q9UBI6 72 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 GSTK1Q9Y2Q3 226 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 MTCH2Q9Y6C9 303 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 COL12A1Q99715 3063 aa-2.94□□□□□ -2.88
RNU6-539P-201ENST00000516665 A0A1W2PNV4 684 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 M0QXV9 152 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 LGALS8O00214 317 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 IFRD1O00458 451 aaPredicted RBP-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 UBDO15205 165 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 EEF1E1O43324 174 aaKnown RBP-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 SLC25A20O43772 301 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 CREB3O43889 395 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 MLNP12872 115 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 SERPINB9P50453 376 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 RHBDL3P58872 404 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 ACTG2P63267 376 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 NAB1Q13506 487 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 DMRTC1Q5HYR2 192 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 SDIM1Q6ZPB5 146 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 SLC36A1Q7Z2H8 476 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 DCXRQ7Z4W1 244 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 LHFPL4Q7Z7J7 247 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 GLRX5Q86SX6 157 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 CENPLQ8N0S6 344 aaPredicted RBP-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 ATAD1Q8NBU5 361 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 OR2M7Q8NG81 312 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 RNF170Q96K19 258 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 RDH12Q96NR8 316 aa-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 TSNAXQ99598 290 aaKnown RBP-2.95□□□□□ -2.88
RNU6-539P-201ENST00000516665 SFXN3Q9BWM7 321 aa-2.95□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms