RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FGF12P61328 243 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 SNCBQ16143 134 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 MICBQ29980 383 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 KLHL22Q53GT1 634 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ACP7Q6ZNF0 438 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ZNF788Q6ZQV5 615 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 BTN2A1Q7KYR7 527 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 NLRC3Q7RTR2 1065 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 KCTD20Q7Z5Y7 419 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 SYS1Q8N2H4 156 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ZFP41Q8N8Y5 198 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ZNRF1Q8ND25 227 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 OR13C5Q8NGS8 318 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ST8SIA4Q92187 359 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 RFT1Q96AA3 541 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
SNF8-206ENST00000509989 JAM3Q9BX67 310 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 CHST5Q9GZS9 411 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 OCEL1Q9H607 264 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ABCB9Q9NP78 766 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 ESM1Q9NQ30 184 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 NLKQ9UBE8 527 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 KAAG1Q9UBP8 84 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 PCDHGB5Q9Y5G0 923 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 PCDHGB1Q9Y5G3 927 aa11.22□□□□□ -0.61
SNF8-206ENST00000509989 MDFIC2A0A1B0GVS7 189 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 OR2AT4A6NND4 320 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 DHRS7CA6NNS2 312 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 J3QT63 122 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 IFNA2P01563 188 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 ISG15P05161 165 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 UBCP0CG48 685 aaKnown RBP11.21□□□□□ -0.61
SNF8-206ENST00000509989 PGA5P0DJD9 388 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 PCMT1P22061 227 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 ACTA2P62736 377 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 ACTG2P63267 376 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 TMEM244Q5VVB8 128 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 RUSC1-AS1Q66K80 236 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 POC1AQ8NBT0 407 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 ZNF485Q8NCK3 441 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 SLAMF9Q96A28 289 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 TBX15Q96SF7 602 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 PLEKHA1Q9HB21 404 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 DNAJB11Q9UBS4 358 aa11.21□□□□□ -0.61
SNF8-206ENST00000509989 TRAV40A0A0B4J280 105 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 RFPL4AA6NLU0 287 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 RNF212BA8MTL3 300 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 RFPL4AL1F8VTS6 287 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 H0YAE9 185 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 SPRY1O43609 319 aaPredicted RBP11.2□□□□□ -0.62
SNF8-206ENST00000509989 MMP9P14780 707 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 ATF1P18846 271 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 GATA3P23771 443 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 MPZP25189 248 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 C21orf33P30042 268 aaPredicted RBP11.2□□□□□ -0.62
SNF8-206ENST00000509989 GABRA2P47869 451 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 NPBWR2P48146 333 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 ERVK11-1P61568 191 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 ARF6P62330 175 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 ST3GAL4Q11206 333 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 TUSC1Q2TAM9 212 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 ATPAF1Q5TC12 328 aaPredicted RBP11.2□□□□□ -0.62
SNF8-206ENST00000509989 BRD3OSQ6XYD6 125 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 C8orf59Q8N0T1 100 aaPredicted RBP11.2□□□□□ -0.62
SNF8-206ENST00000509989 ZNF676Q8N7Q3 588 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 BPIFB6Q8NFQ5 453 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 OR13C3Q8NGS6 347 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 OR13C9Q8NGT0 318 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 NANPQ8TBE9 248 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 GATAD2BQ8WXI9 593 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 TAF15Q92804 592 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNF8-206ENST00000509989 TMIGD2Q96BF3 282 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 UPRTQ96BW1 309 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 NRIP2Q9BQI9 281 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 SIRPDQ9H106 197 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 HES4Q9HCC6 221 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 C8orf4Q9NR00 106 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 INPP5EQ9NRR6 644 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 PAK1IP1Q9NWT1 392 aaPredicted RBP11.2□□□□□ -0.62
SNF8-206ENST00000509989 PSORS1C1Q9UIG5 152 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 HHLA2Q9UM44 414 aa11.2□□□□□ -0.62
SNF8-206ENST00000509989 DIMT1Q9UNQ2 313 aaKnown RBP11.2□□□□□ -0.62
SNF8-206ENST00000509989 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 MEX3AA1L020 520 aaKnown RBP11.19□□□□□ -0.62
SNF8-206ENST00000509989 NDUFA2O43678 99 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 ANGPTL7O43827 346 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 IGKV1D-12P01611 117 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 ACAA1P09110 424 aaPredicted RBP11.19□□□□□ -0.62
SNF8-206ENST00000509989 AZGP1P25311 298 aaKnown RBP11.19□□□□□ -0.62
SNF8-206ENST00000509989 SOX2P48431 317 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 IL18R1Q13478 541 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 ARMCX4Q5H9R4 360 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 AHSA2Q719I0 299 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 PDZD9Q8IXQ8 264 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 SETD9Q8NE22 299 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 OR51A2Q8NGJ7 313 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 OR5D18Q8NGL1 313 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 OR5AK2Q8NH90 309 aa11.19□□□□□ -0.62
SNF8-206ENST00000509989 ZNF671Q8TAW3 534 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms