RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	CLDN12	P56749	244 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	RIPPLY3	P57055	190 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SNRPD2	P62316	118 aa	Known RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ZNF763	Q0D2J5	394 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	TMEM187	Q14656	261 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	EBP	Q15125	230 aa	Known RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ZIC1	Q15915	447 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	LPAL2	Q16609	132 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ODF4	Q2M2E3	257 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	TTLL9	Q3SXZ7	439 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MORN2	Q502X0	79 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	NHLRC3	Q5JS37	347 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	EIF5AL1	Q6IS14	154 aa	Known RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	PWWP2B	Q6NUJ5	590 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	FAAP20	Q6NZ36	180 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	TOMM20L	Q6UXN7	152 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	WDR82	Q6UXN9	313 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	C19orf35	Q6ZS72	473 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	FA2H	Q7L5A8	372 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	CHMP1B	Q7LBR1	199 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	PIGZ	Q86VD9	579 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SLC30A8	Q8IWU4	369 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	GBGT1	Q8N5D6	347 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MS4A15	Q8N5U1	240 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	OR4D11	Q8NGI4	311 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	OR9I1	Q8NGQ6	314 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	OR1J2	Q8NGS2	313 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	OR56B4	Q8NH76	319 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	OR13C6P	Q8NH95	151 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SLC7A13	Q8TCU3	470 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	HAVCR2	Q8TDQ0	301 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	CANT1	Q8WVQ1	401 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ARL11	Q969Q4	196 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MRPS24	Q96EL2	167 aa	Known RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	HPDL	Q96IR7	371 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SLC35G5	Q96KT7	338 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	CXorf58	Q96LI9	332 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	KCTD7	Q96MP8	289 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	RBP7	Q96R05	134 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MYADM	Q96S97	322 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MARVELD1	Q9BSK0	173 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	FAAP24	Q9BTP7	215 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	RSPO3	Q9BXY4	272 aa	Predicted RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	PECR	Q9BY49	303 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ACTR3C	Q9C0K3	210 aa	Predicted RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	NXF5	Q9H1B4	397 aa	Known RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SRMS	Q9H3Y6	488 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	FBXO6	Q9NRD1	293 aa	Predicted RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SMCO4	Q9NRQ5	59 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	UBQLN4	Q9NRR5	601 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	B3GAT1	Q9P2W7	334 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	COMMD3	Q9UBI1	195 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	P2RX2	Q9UBL9	471 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	NUFIP1	Q9UHK0	495 aa	Known RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	PSORS1C1	Q9UIG5	152 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ECM29	Q5VYK3	1845 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	IGSF9B	Q9UPX0	1349 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ABCA8	O94911	1581 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	CC2D2A	Q9P2K1	1620 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	ZSWIM8	A7E2V4	1837 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		A0A087WUJ7	227 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		A0A087X0K7	114 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		A0A1B0GUS0	222 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		A0A1W2PPE3	182 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		A0A1W2PPV9	198 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	CLDN24	A6NM45	220 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	YJEFN3	A6XGL0	299 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		A8MVM7	634 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		E5RGE8	158 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		G3V4G9	280 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672		J3QLI3	93 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	CLDN5	O00501	218 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	CASK	O14936	926 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	RGS16	O15492	202 aa	Predicted RBP	3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	RBFOX2	O43251	390 aa	Known RBP eCLIP	3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	CRLF1	O75462	422 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	HAND1	O96004	215 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	OR5H8	P0DN80	308 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	ABO	P16442	354 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	MYL9	P24844	172 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	CMPK1	P30085	196 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	GYG1	P46976	350 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	NOV	P48745	357 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	SULT1A1	P50225	295 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	SULT1A2	P50226	295 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	LBX1	P52954	281 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	SNRPD1	P62314	119 aa	Known RBP	3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	SELENOW	P63302	87 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	NTHL1	P78549	312 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	KLRC3	Q07444	240 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	ZNF154	Q13106	437 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	ZNF235	Q14590	738 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	JOSD1	Q15040	202 aa	Predicted RBP	3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	RAB35	Q15286	201 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	ACKR1	Q16570	336 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	HLA-B	Q31612	363 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	ZNF404	Q494X3	552 aa		3.89	□□□□□ -1.79
CCDC66-222	ENST00000494672	NXNL2	Q5VZ03	156 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms