RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SIGLEC5O15389 551 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 HTR1AP08908 422 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 ACAA1P09110 424 aaPredicted RBP18.71■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF19P17023 458 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 PEX2P28328 305 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 NANOS3P60323 173 aaKnown RBP18.71■□□□□ 0.59
SNIP1-203ENST00000493916 IKZF1Q13422 519 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 LRRC36Q1X8D7 754 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF691Q5VV52 312 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 RDH10Q8IZV5 341 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 LY6G5BQ8NDX9 201 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 PP6455Q8WZ26 134 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 ZNF649Q9BS31 505 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 PKIBQ9C010 78 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 MS4A7Q9GZW8 240 aaPredicted RBP18.71■□□□□ 0.59
SNIP1-203ENST00000493916 SLC7A11Q9UPY5 501 aa18.71■□□□□ 0.59
SNIP1-203ENST00000493916 IGKV1D-17A0A075B6S4 117 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 H3BSH0 61 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 TRIM77I1YAP6 450 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 SYNGR1O43759 233 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 WBP4O75554 376 aaKnown RBP18.7■□□□□ 0.58
SNIP1-203ENST00000493916 TOX4O94842 621 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 PSG2P11465 335 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 SELLP14151 372 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 BPIFB3P59826 476 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 UBE2V2Q15819 145 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 SMIM21Q3B7S5 101 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 KLHL22Q53GT1 634 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 METTL11BQ5VVY1 283 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 ACP7Q6ZNF0 438 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 LHFPL3Q86UP9 236 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 BCL6BQ8N143 479 aaPredicted RBP18.7■□□□□ 0.58
SNIP1-203ENST00000493916 SIGLECL1Q8N7X8 197 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.7■□□□□ 0.58
SNIP1-203ENST00000493916 OR52I1Q8NGK6 324 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 C8orf46Q8TAG6 207 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 FAM216AQ8WUB2 273 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 WDFY2Q96P53 400 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 NRIP2Q9BQI9 281 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 PCGF1Q9BSM1 259 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 JAM3Q9BX67 310 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 SIRPDQ9H106 197 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 ESM1Q9NQ30 184 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 ERVK13-1Q9NX77 482 aa18.7■□□□□ 0.58
SNIP1-203ENST00000493916 IGHV3OR16-10A0A075B7F0 116 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 SERPINA3P01011 423 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 SFTPBP07988 381 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 CAV3P56539 151 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 IL24Q13007 206 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 MRPL28Q13084 256 aaKnown RBP18.69■□□□□ 0.58
SNIP1-203ENST00000493916 DGUOKQ16854 277 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 GPR157Q5UAW9 335 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 TTC23Q5W5X9 447 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 RBMS3Q6XE24 437 aaKnown RBP18.69■□□□□ 0.58
SNIP1-203ENST00000493916 CALHM1Q8IU99 346 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 ZDHHC22Q8N966 263 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 SDSLQ96GA7 329 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 TBX15Q96SF7 602 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 DCTN5Q9BTE1 182 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 CNTD2Q9H8S5 307 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 HES4Q9HCC6 221 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 SLC25A10Q9UBX3 287 aaPredicted RBP18.69■□□□□ 0.58
SNIP1-203ENST00000493916 KPTNQ9Y664 436 aa18.69■□□□□ 0.58
SNIP1-203ENST00000493916 FAM230AA0A1W2PPH8 454 aa18.68■□□□□ 0.58
SNIP1-203ENST00000493916 OR4C45A6NMZ5 311 aa18.68■□□□□ 0.58
SNIP1-203ENST00000493916 TFF1P04155 84 aa18.68■□□□□ 0.58
SNIP1-203ENST00000493916 FUT6P51993 359 aa18.68■□□□□ 0.58
SNIP1-203ENST00000493916 ALKBH1Q13686 389 aaKnown RBP18.68■□□□□ 0.58
SNIP1-203ENST00000493916 PDCD1Q15116 288 aa18.68■□□□□ 0.58
SNIP1-203ENST00000493916 CNN3Q15417 329 aaKnown RBP18.68■□□□□ 0.58
SNIP1-203ENST00000493916 KIR3DL3Q8N743 410 aa18.68■□□□□ 0.58
SNIP1-203ENST00000493916 TRMT10AQ8TBZ6 339 aaKnown RBP18.68■□□□□ 0.58
SNIP1-203ENST00000493916 ZNF488Q96MN9 340 aa18.68■□□□□ 0.58
SNIP1-203ENST00000493916 ZNF48Q96MX3 618 aaPredicted RBP18.68■□□□□ 0.58
SNIP1-203ENST00000493916 FGF20Q9NP95 211 aaPredicted RBP18.68■□□□□ 0.58
SNIP1-203ENST00000493916 CASQ2O14958 399 aaPredicted RBP18.67■□□□□ 0.58
SNIP1-203ENST00000493916 GABRA2P47869 451 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 ADARB1P78563 741 aaKnown RBP18.67■□□□□ 0.58
SNIP1-203ENST00000493916 SMN1Q16637 294 aaKnown RBP18.67■□□□□ 0.58
SNIP1-203ENST00000493916 OGFRL1Q5TC84 451 aaPredicted RBP18.67■□□□□ 0.58
SNIP1-203ENST00000493916 UTS2BQ765I0 119 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 ANGPTL5Q86XS5 388 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 SETD9Q8NE22 299 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 DNAAF1Q8NEP3 725 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 HAVCR2Q8TDQ0 301 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 NPRL2Q8WTW4 380 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 CYGBQ8WWM9 190 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 ADAT3Q96EY9 351 aaPredicted RBP18.67■□□□□ 0.58
SNIP1-203ENST00000493916 ISG20L2Q9H9L3 353 aaKnown RBP18.67■□□□□ 0.58
SNIP1-203ENST00000493916 HHLA2Q9UM44 414 aa18.67■□□□□ 0.58
SNIP1-203ENST00000493916 IGKV1-27A0A075B6S5 117 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 ANKRD65E5RJM6 399 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 NXPH2O95156 264 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 CLIC3O95833 236 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 RPSAP08865 295 aaKnown RBP18.66■□□□□ 0.58
SNIP1-203ENST00000493916 ERVK11-1P61568 191 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 ARF6P62330 175 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 UBA52P62987 128 aaKnown RBP18.66■□□□□ 0.58
SNIP1-203ENST00000493916 IL18R1Q13478 541 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 DHRSXQ8N5I4 330 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms