RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 S100A13Q99584 98 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 MICU1Q9BPX6 476 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 LMF2Q9BU23 707 aaKnown RBP3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 ALG12Q9BV10 488 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 SELENOIQ9C0D9 397 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 COMMD4Q9H0A8 199 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 SYT4Q9H2B2 425 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 HIPK2Q9H2X6 1198 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 SMDT1Q9H4I9 107 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 KLHL31Q9H511 634 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 FN3KRPQ9HA64 309 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 PDE7BQ9NP56 450 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 WSB2Q9NYS7 404 aaPredicted RBP3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 APOBEC3BQ9UH17 382 aaKnown RBP3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 FBXO4Q9UKT5 387 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 RPH3AQ9Y2J0 694 aaPredicted RBP3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 NOP16Q9Y3C1 178 aaKnown RBP3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 CSAG2Q9Y5P2 127 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF780BQ9Y6R6 833 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 ZFHX4Q86UP3 3567 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 MPDZO75970 2070 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 CACNA1BQ00975 2339 aa3.02□□□□□ -1.93
CRNKL1-203ENST00000490258 UNC13CQ8NB66 2214 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ATRXP46100 2492 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 MUC6Q6W4X9 2439 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 DMDP11532 3685 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 LAMA1P25391 3075 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 LY6G6EA0A0G2JKS1 128 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 hCG_1809904A0A1W2PP81 198 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 A0A1W2PR64 198 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 A0A1W2PRV1 198 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 TMEM72A0PK05 275 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 MBD3L4A6NDZ8 208 aaPredicted RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 MBD3L3A6NE82 208 aaPredicted RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 CXorf65A6NEN9 183 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SERINC4A6NH21 518 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 MSGN1A6NI15 193 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 GLOD5A6NK44 160 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 LINC00473A8K010 186 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF785A8K8V0 405 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF724A8MTY0 619 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SEC14L6B5MCN3 397 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 RAB27BO00194 218 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 PEX12O00623 359 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 CCSO14618 274 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 PHOX2AO14813 284 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 TXNL1O43396 289 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 TGOLN2O43493 480 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 LRP3O75074 770 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SRSF10O75494 262 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 MED6O75586 246 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 STK17BO94768 372 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 NKX2-2O95096 273 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 FARS2O95363 451 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 CYB5AP00167 134 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 CST4P01036 141 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 IFNA17P01571 189 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 CD2P06729 351 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SEC11BP0C7V7 166 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 DANCRP0C864 163 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SP9P0CG40 484 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 PET100P0DJ07 73 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 C8orf89P0DMQ9 161 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SFTPCP11686 197 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 RNH1P13489 461 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 CPMP14384 443 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 RPS2P15880 293 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 NQO2P16083 231 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 EGR1P18146 543 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 HNRNPA2B1P22626 353 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 DDTP30046 118 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 CD80P33681 288 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 THBS4P35443 961 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 TNFRSF4P43489 277 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SOX2P48431 317 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF84P51523 738 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF41P51814 821 aaPredicted RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF134P52741 427 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 EFNA3P52797 238 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 RPS23P62266 143 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 PMPCAQ10713 525 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 RAB32Q13637 225 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 GPR18Q14330 331 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 RBM39Q14498 530 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 NFATC4Q14934 902 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ATXN7L3Q14CW9 347 aaPredicted RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 PPA1Q15181 289 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 SURF2Q15527 256 aaPredicted RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 TAF13Q15543 124 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 TMEM128Q5BJH2 165 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 RNASE10Q5GAN6 216 aaKnown RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 BEX5Q5H9J7 111 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 C9orf152Q5JTZ5 239 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ARHGAP40Q5TG30 622 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 ULK3Q6PHR2 472 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 INO80CQ6PI98 192 aaPredicted RBP3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 OPN5Q6U736 354 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 UNQ6126/PRO20091Q6UXV3 157 aa3.01□□□□□ -1.93
CRNKL1-203ENST00000490258 NPSR1Q6W5P4 371 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms