RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CLDN11O75508 207 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 CFDP00746 253 aaPredicted RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 NMBP08949 121 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 CSF3P09919 207 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SLC2A1P11166 492 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 NQO2P16083 231 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SDC4P31431 198 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 CDKN2CP42773 168 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 FOXG1P55316 489 aaPredicted RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 DLX1P56177 255 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 FABP9Q0Z7S8 132 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 PEA15Q15121 130 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SF3A2Q15428 464 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 DNAJC24Q6P3W2 148 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 TBPL2Q6SJ96 375 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 ALKAL2Q6UX46 152 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 LRRN1Q6UXK5 716 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 C9orf40Q8IXQ3 194 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 FAM71AQ8IYT1 594 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR9Q2Q8NGE9 314 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR2T35Q8NGX2 323 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR4Q3Q8NH05 313 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR5K1Q8NHB7 308 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MRAPQ8TCY5 172 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 GBF1Q92538 1859 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 AP3S1Q92572 193 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 PKMYT1Q99640 499 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 RIOK2Q9BVS4 552 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 TOLLIPQ9H0E2 274 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MIXL1Q9H2W2 232 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 DHX35Q9H5Z1 703 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 ABCB9Q9NP78 766 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SIRT7Q9NRC8 400 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 KLK11Q9UBX7 282 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF225Q9UK10 706 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 NSG2Q9Y328 171 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MRPS18BQ9Y676 258 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 CITO14578 2027 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 COL4A2P08572 1712 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SLC5A10A0PJK1 596 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 INSIG1O15503 277 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 PPIHO43447 177 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR10H3O60404 316 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SIX6O95475 246 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 CA1P00915 261 aaPredicted RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 CRYABP02511 175 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF25P17030 456 aaPredicted RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 DDTP30046 118 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SDC2P34741 201 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MPIP34949 423 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 TSFMP43897 325 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SKP1P63208 163 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 LCN2P80188 198 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SEMG2Q02383 582 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 KRTAP1-1Q07627 177 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 TWF1Q12792 350 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MADCAM1Q13477 382 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MRPL23Q16540 153 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 QRICH1Q2TAL8 776 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 LGALSLQ3ZCW2 172 aaPredicted RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SLC36A2Q495M3 483 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 BCL2L15Q5TBC7 163 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR52W1Q6IF63 320 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 SMIM15Q7Z3B0 74 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 ZFAND4Q86XD8 727 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 RBM45Q8IUH3 476 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF383Q8NA42 475 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR9A2Q8NGT5 310 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 HGDQ93099 445 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 UCN3Q969E3 161 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 FAM19A4Q96LR4 140 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR2M2Q96R28 347 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 EBNA1BP2Q99848 306 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 C7orf50Q9BRJ6 194 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MARVELD1Q9BSK0 173 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 RNF126Q9BV68 326 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 OR51V1Q9H2C8 321 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 EML4Q9HC35 981 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 ASCL3Q9NQ33 180 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 PLCXD1Q9NUJ7 323 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 RBAKQ9NYW8 714 aaPredicted RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 METTL1Q9UBP6 276 aaKnown RBP2.31□□□□□ -2.04
UBXN4-208ENST00000490163 COLEC10Q9Y6Z7 277 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 V9GYH0 126 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 PLXNA3P51805 1871 aa2.31□□□□□ -2.04
UBXN4-208ENST00000490163 MCM3APO60318 1980 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PTPRDP23468 1912 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 C5orf58C9J3I9 102 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 HOXC4P09017 264 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OR4E1P0C645 316 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 CEACAM8P31997 349 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 LEPP41159 167 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RGS6P49758 472 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 NUTF2P61970 127 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 LTBQ06643 244 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ECH1Q13011 328 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 SKP2Q13309 424 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF79Q15937 498 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 NHLRC3Q5JS37 347 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 C1orf94Q6P1W5 598 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms