RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 OR5AK2Q8NH90 309 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 DACT3Q96B18 629 aaPredicted RBP14.42□□□□□ -0.1
MDC1-206ENST00000489540 ADAT3Q96EY9 351 aaPredicted RBP14.42□□□□□ -0.1
MDC1-206ENST00000489540 MED30Q96HR3 178 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 NUDT16L1Q9BRJ7 211 aaKnown RBP14.42□□□□□ -0.1
MDC1-206ENST00000489540 PKIBQ9C010 78 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 BABAM2Q9NXR7 383 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 NLKQ9UBE8 527 aa14.42□□□□□ -0.1
MDC1-206ENST00000489540 TRBV2A0A0J9YWF9 115 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 OR2AT4A6NND4 320 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 GPR37O15354 613 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 ENSAO43768 121 aaKnown RBP14.41□□□□□ -0.1
MDC1-206ENST00000489540 ZFPL1O95159 310 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 PPIAL4GP0DN37 164 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 PRKACBP22694 351 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 MPZP25189 248 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 ST3GAL4Q11206 333 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 LAIR2Q6ISS4 152 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 RPL22L1Q6P5R6 122 aaKnown RBP14.41□□□□□ -0.1
MDC1-206ENST00000489540 BPIFB6Q8NFQ5 453 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 OR13C3Q8NGS6 347 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 TRMT10AQ8TBZ6 339 aaKnown RBP14.41□□□□□ -0.1
MDC1-206ENST00000489540 BORCS8Q96FH0 119 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 RASSF4Q9H2L5 321 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 SNTG1Q9NSN8 517 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 PSORS1C1Q9UIG5 152 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 NKX6-3A6NJ46 265 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 NDUFB3O43676 98 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 PGA5P0DJD9 388 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 ADRA2CP18825 462 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 ATF1P18846 271 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 ATP1B3P54709 279 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 AQP4P55087 323 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 IL24Q13007 206 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 RIPK1Q13546 671 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 LRRC10Q5BKY1 277 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 OR2G6Q5TZ20 316 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 ANGPTL5Q86XS5 388 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 OR51A4Q8NGJ6 313 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 OR10AC1Q8NH08 325 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 OR52N1Q8NH53 320 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 ANGPTL6Q8NI99 470 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 NPRL2Q8WTW4 380 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 NEK6Q9HC98 313 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 SMURF1Q9HCE7 757 aa14.41□□□□□ -0.1
MDC1-206ENST00000489540 C22orf46C9J442 243 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 SYNGR1O43759 233 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 XPNPEP2O43895 674 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 OCM2P0CE71 109 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 OCMP0CE72 109 aaPredicted RBP14.4□□□□□ -0.1
MDC1-206ENST00000489540 AMY2BP19961 511 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 RBP2P50120 134 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 GTF2A1P52655 376 aaPredicted RBP14.4□□□□□ -0.1
MDC1-206ENST00000489540 IL13RA1P78552 427 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 SMIM21Q3B7S5 101 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 ACP7Q6ZNF0 438 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 ZNF788Q6ZQV5 615 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 BTN2A1Q7KYR7 527 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 CALHM1Q8IU99 346 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 STX19Q8N4C7 294 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 PNLDC1Q8NA58 520 aaKnown RBP14.4□□□□□ -0.1
MDC1-206ENST00000489540 OR5D14Q8NGL3 314 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 ST8SIA4Q92187 359 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 SPSB1Q96BD6 273 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 PDCD1LG2Q9BQ51 273 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 NRIP2Q9BQI9 281 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 CLEC2DQ9UHP7 191 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 DHDHQ9UQ10 334 aa14.4□□□□□ -0.1
MDC1-206ENST00000489540 SIGLEC5O15389 551 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 FSHBP01225 129 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 MT-ND2P03891 347 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 PSG2P11465 335 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 GABRA2P47869 451 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 MTCP1P56278 107 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 CDK5R1Q15078 307 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 ARMCX4Q5H9R4 360 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 SERPINA12Q8IW75 414 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 FAM216BQ8N7L0 139 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 GATAD2BQ8WXI9 593 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 DMRTB1Q96MA1 342 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 ZCCHC4Q9H5U6 513 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
MDC1-206ENST00000489540 IGKV1D-17A0A075B6S4 117 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 IGKV1-27A0A075B6S5 117 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 IGKV1-9A0A0C4DH69 117 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 OGG1O15527 345 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 ALX3O95076 343 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 NXPH2O95156 264 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 EPHA1P21709 976 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 FPR2P25090 351 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 AZGP1P25311 298 aaKnown RBP14.38□□□□□ -0.11
MDC1-206ENST00000489540 HSPA13P48723 471 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 ERVK11-1P61568 191 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 IKZF1Q13422 519 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 C6orf141Q5SZD1 244 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 LHFPL2Q6ZUX7 228 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 PARP16Q8N5Y8 322 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 RPS4Y2Q8TD47 263 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 GPR148Q8TDV2 347 aa14.38□□□□□ -0.11
MDC1-206ENST00000489540 ZNF488Q96MN9 340 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms