RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 NDUFA2O43678 99 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 ENSAO43768 121 aaKnown RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 PIP5K1CO60331 668 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 SHOX2O60902 331 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 PTP4A3O75365 173 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 KHDRBS3O75525 346 aaKnown RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 PRSS1P07477 247 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 MELTFP08582 738 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 IRF2P14316 349 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 MMP9P14780 707 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 CTLA4P16410 223 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 KDELR2P33947 212 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 RPL4P36578 427 aaKnown RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 CFHR2P36980 270 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 PSMB10P40306 273 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 PMELP40967 661 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 CD200P41217 278 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 OR1E2P47887 323 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 ERFP50548 548 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 SELENOWP63302 87 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 HIST1H3AP68431 136 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 MAB21L1Q13394 359 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 TRAM2Q15035 370 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 KCNJ8Q15842 424 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 TAF9Q16594 264 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 RSPO1Q2MKA7 263 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 ZBED5Q49AG3 693 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 CCDC92Q53HC0 331 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 CYBRD1Q53TN4 286 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 COQ5Q5HYK3 327 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 HIST2H3PS2Q5TEC6 136 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 AGBL2Q5U5Z8 902 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 OR2T2Q6IF00 324 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 C1orf94Q6P1W5 598 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 LYPD2Q6UXB3 125 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 KCTD8Q6ZWB6 473 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 TMPRSS11FQ6ZWK6 438 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 HIST2H3AQ71DI3 136 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 FAM122BQ7Z309 247 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 NRMQ8IXM6 262 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 OFCC1Q8IZS5 231 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 OR5AS1Q8N127 324 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 OR10AD1Q8NGE0 317 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 OR10V1Q8NGI7 309 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 OR11L1Q8NGX0 322 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 LINC01006Q8NI28 216 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 ACOT11Q8WXI4 607 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 LZICQ8WZA0 190 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC7A6Q92536 515 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 Q96M85 177 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 COQ7Q99807 217 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 PKP2Q99959 881 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 SIKE1Q9BRV8 207 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 FNDC11Q9BVV2 318 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 HCAR1Q9BXC0 346 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 TRIM15Q9C019 465 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 NDEL1Q9GZM8 345 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 HDHD2Q9H0R4 259 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 MARCH7Q9H992 704 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 NMNAT1Q9HAN9 279 aaPredicted RBP3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 ACOXLQ9NUZ1 547 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 MRGBPQ9NV56 204 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 A0A087WUU8 490 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 IGHV1-69DA0A0B4J2H0 117 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 C5orf63A6NC05 138 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 SH2D7A6NKC9 451 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 BBIP1A8MTZ0 92 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 H7C1C5 153 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 FXYD1O00168 92 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 LGALS8O00214 317 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 CDC42EP2O14613 210 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 FFAR1O14842 300 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 RER1O15258 196 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 GPR137BO60478 399 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC16A7O60669 478 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 NDUFB2O95178 105 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 PTBP3O95758 552 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 TXNDC12O95881 172 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ECDO95905 644 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 IGHV1-69P01742 117 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 HLA-DPB1P04440 258 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 IFNW1P05000 195 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 SFTPBP07988 381 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF26P17031 533 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 CRABP1P29762 137 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 IER3P46695 156 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 RAD23AP54725 363 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 LCN6P62502 163 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 COX10Q12887 443 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 ECH1Q13011 328 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 KRR1Q13601 381 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 GK2Q14410 553 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 CTF1Q16619 201 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 LRRC23Q53EV4 343 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 MESTQ5EB52 335 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 CLEC12AQ5QGZ9 265 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 FAM201AQ5SY85 155 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 BEND6Q5SZJ8 279 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 METTL11BQ5VVY1 283 aa3.22□□□□□ -1.89
SNRNP40-205ENST00000486941 GPR139Q6DWJ6 353 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms