RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ENSAO43768 121 aaKnown RBP13.47□□□□□ -0.25
DDR1-246ENST00000485023 SERPINA3P01011 423 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 ISG15P05161 165 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 DCKP27707 260 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 NPY4RP50391 375 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 CNN3Q15417 329 aaKnown RBP13.47□□□□□ -0.25
DDR1-246ENST00000485023 LAIR2Q6ISS4 152 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 AHSA2Q719I0 299 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 SLC36A1Q7Z2H8 476 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 TEX29Q8N6K0 151 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 POC1AQ8NBT0 407 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 CCDC54Q8NEL0 328 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 BPIFB6Q8NFQ5 453 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 TSEN15Q8WW01 171 aaKnown RBP13.47□□□□□ -0.25
DDR1-246ENST00000485023 TFAP2CQ92754 450 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 GGHQ92820 318 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 DACT3Q96B18 629 aaPredicted RBP13.47□□□□□ -0.25
DDR1-246ENST00000485023 C12orf43Q96C57 262 aaKnown RBP13.47□□□□□ -0.25
DDR1-246ENST00000485023 TMEM80Q96HE8 168 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 GAFA1Q96PS6 74 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 MDFIQ99750 246 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 JAM3Q9BX67 310 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
DDR1-246ENST00000485023 HSPE1-MOB4S4R3N1 261 aa13.47□□□□□ -0.25
DDR1-246ENST00000485023 IGKV1-27A0A075B6S5 117 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 TRBV2A0A0J9YWF9 115 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 OR2AT4A6NND4 320 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 NDUFB3O43676 98 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 ZFPL1O95159 310 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 OCM2P0CE71 109 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 OCMP0CE72 109 aaPredicted RBP13.46□□□□□ -0.25
DDR1-246ENST00000485023 CEBPDP49716 269 aaPredicted RBP13.46□□□□□ -0.25
DDR1-246ENST00000485023 PAX8Q06710 450 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 TMPRSS11AQ6ZMR5 421 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 BTN2A1Q7KYR7 527 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 OR13C9Q8NGT0 318 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 OR5AK2Q8NH90 309 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 ANGPTL6Q8NI99 470 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 PP6455Q8WZ26 134 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 H1FXQ92522 213 aaKnown RBP13.46□□□□□ -0.25
DDR1-246ENST00000485023 SLAMF9Q96A28 289 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 BORCS8Q96FH0 119 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 SLC6A7Q99884 636 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 COMMD4Q9H0A8 199 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 POLDIP2Q9Y2S7 368 aa13.46□□□□□ -0.25
DDR1-246ENST00000485023 EXOSC1Q9Y3B2 195 aaKnown RBP13.46□□□□□ -0.25
DDR1-246ENST00000485023 IGKV1D-17A0A075B6S4 117 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 TRAV40A0A0B4J280 105 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 IGKV1-9A0A0C4DH69 117 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 KIR2DS1A0A191URI9 304 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 TMEM212A6NML5 194 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 NXPH2O95156 264 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 FSHBP01225 129 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 CCDC159P0C7I6 412 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 PGA5P0DJD9 388 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 IGHV4-38-2P0DP08 117 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 PSG2P11465 335 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 AZGP1P25311 298 aaKnown RBP13.45□□□□□ -0.26
DDR1-246ENST00000485023 POU3F4P49335 361 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 FUT6P51993 359 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 FGF12P61328 243 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 IL13RA1P78552 427 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 ST3GAL4Q11206 333 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 MRPL28Q13084 256 aaKnown RBP13.45□□□□□ -0.26
DDR1-246ENST00000485023 DGUOKQ16854 277 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 KLF17Q5JT82 389 aaPredicted RBP13.45□□□□□ -0.26
DDR1-246ENST00000485023 CD276Q5ZPR3 534 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 ACP7Q6ZNF0 438 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 GATAD2BQ8WXI9 593 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 RFT1Q96AA3 541 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 C10orf35Q96D05 121 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 ELL3Q9HB65 397 aaPredicted RBP13.45□□□□□ -0.26
DDR1-246ENST00000485023 CHCHD3Q9NX63 227 aaKnown RBP13.45□□□□□ -0.26
DDR1-246ENST00000485023 KAAG1Q9UBP8 84 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 DHDHQ9UQ10 334 aa13.45□□□□□ -0.26
DDR1-246ENST00000485023 CAB39Q9Y376 341 aaPredicted RBP13.45□□□□□ -0.26
DDR1-246ENST00000485023 EFCAB10A6NFE3 127 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 RNF212BA8MTL3 300 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 TCF21O43680 179 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 LALBAP00709 142 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 SFTPBP07988 381 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 NDUFB7P17568 137 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 ATF1P18846 271 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 SOX2P48431 317 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 TGM4P49221 684 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 CAPZA1P52907 286 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 SCGB2A2Q13296 93 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 SMIM21Q3B7S5 101 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 LRRC10Q5BKY1 277 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 ZNF788Q6ZQV5 615 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 SLC25A26Q70HW3 274 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 STX19Q8N4C7 294 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 BPIFB2Q8N4F0 458 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 ZFP41Q8N8Y5 198 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 TMEM185AQ8NFB2 350 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 RGP1Q92546 391 aaPredicted RBP13.44□□□□□ -0.26
DDR1-246ENST00000485023 SPACA5Q96QH8 159 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 NRIP2Q9BQI9 281 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms