RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SMARCD1Q96GM5 515 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PPP1R36Q96LQ0 422 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PRAP1Q96NZ9 151 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 BIRC8Q96P09 236 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 SIGLEC12Q96PQ1 595 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 TAPBPLQ9BX59 468 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 SLC25A2Q9BXI2 301 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 LINC00597Q9H2U6 94 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF696Q9H7X3 374 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 SDF2L1Q9HCN8 221 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 HEBP1Q9NRV9 189 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 OPN4Q9UHM6 478 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 NEUROG3Q9Y4Z2 214 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 HES2Q9Y543 173 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PHF3Q92576 2039 aaKnown RBP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 IGHV1-69DA0A0B4J2H0 117 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 H3BQV1 296 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 I3L4J1 428 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 PSPHP1O15172 72 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 NDUFS5O43920 106 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 RP2O75695 350 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 BGLAPP02818 100 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 CTSLP07711 333 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 RCVRNP35243 200 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 TALDO1P37837 337 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 MDH2P40926 338 aaKnown RBP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 GNG10P50151 68 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 NDUFA8P51970 172 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 NCBP2P52298 156 aaKnown RBP eCLIP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF138P52744 262 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 ARG2P78540 354 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 RGNQ15493 299 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 GUCA2BQ16661 112 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 LRRC26Q2I0M4 334 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 GSG1Q2KHT4 349 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 TIMM50Q3ZCQ8 353 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF658BQ4V348 819 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 SMUG1Q53HV7 270 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 METTL21CQ5VZV1 264 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 KCTD16Q68DU8 428 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 FAAP20Q6NZ36 180 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 RTL4Q6ZR62 310 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 TMEM179BQ7Z7N9 219 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 KLHDC8BQ8IXV7 354 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 RIBC1Q8N443 379 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 C16orf78Q8WTQ4 265 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 FAM222BQ8WU58 562 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 VSIG2Q96IQ7 327 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 OR10C1Q96KK4 312 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 LINC00479Q96M42 142 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 MAGEB18Q96M61 343 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 EBNA1BP2Q99848 306 aaKnown RBP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 FAAP24Q9BTP7 215 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 SFXN3Q9BWM7 321 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 TMEM100Q9NV29 134 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 PAQR5Q9NXK6 330 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 PCYOX1Q9UHG3 505 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 ARL2BPQ9Y2Y0 163 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 MOB4Q9Y3A3 225 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.32□□□□□ -1.88
PTCD3-214ENST00000483925 HEBP2Q9Y5Z4 205 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 PLEKHG1Q9ULL1 1385 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 RIMS2Q9UQ26 1411 aa3.32□□□□□ -1.88
PTCD3-214ENST00000483925 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 RLFQ13129 1914 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 SNAPC4Q5SXM2 1469 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 NPHP4O75161 1426 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 PALLDQ8WX93 1383 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 NFASCO94856 1347 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 PGRMC1O00264 195 aaKnown RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 UPK2O00526 184 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 REM1O75628 298 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 GATBO75879 557 aaKnown RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 IGKV1D-16P01601 117 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 CD74P04233 296 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 ZDHHC11BP0C7U3 371 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 HIST1H1EP10412 219 aaKnown RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 CD99P14209 185 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 AKR1C4P17516 323 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 MYL12AP19105 171 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 DTYMKP23919 212 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 RPS12P25398 132 aaKnown RBP3.31□□□□□ -1.88
PTCD3-214ENST00000483925 APLNRP35414 380 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 HBG1P69891 147 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 HBG2P69892 147 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 SLC7A9P82251 487 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 MS4A2Q01362 244 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 IFITM3Q01628 133 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 REG3AQ06141 175 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 TCEAL5Q5H9L2 206 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 ARL9Q6T311 187 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 FAM231DQ6ZW35 169 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 CALHM1Q8IU99 346 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 PRSS58Q8IYP2 241 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 Q8N377 158 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 CCNYL1Q8N7R7 359 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 GPR26Q8NDV2 337 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 OR1M1Q8NGA1 313 aa3.31□□□□□ -1.88
PTCD3-214ENST00000483925 OR13G1Q8NGZ3 307 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms