RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ATF1P18846 271 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 RAB3AP20336 220 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 DTYMKP23919 212 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 GDF1P27539 372 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 AQP1P29972 269 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 MYCNOSP40205 109 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CBX5P45973 191 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 GALR1P47211 349 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 OR4D2P58180 307 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 RPS21P63220 83 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CXCL6P80162 114 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 BAXQ07812 192 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CYP24A1Q07973 514 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ZNF763Q0D2J5 394 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CDC20Q12834 499 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 PTGES3Q15185 160 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ZNF658BQ4V348 819 aaPredicted RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 LAMTOR1Q6IAA8 161 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ZNF544Q6NX49 715 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 EPGNQ6UW88 154 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 FAM19A5Q7Z5A7 132 aaPredicted RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 GID4Q8IVV7 300 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CPNE9Q8IYJ1 553 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 BLIDQ8IZY5 108 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 RIBC1Q8N443 379 aaPredicted RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 FAM71E2Q8N5Q1 922 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 TMEM252Q8N6L7 170 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 OR9G1Q8NH87 305 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 C16orf78Q8WTQ4 265 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CASTOR1Q8WTX7 329 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 TESCQ96BS2 214 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 DCPSQ96C86 337 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 TLCD1Q96CP7 247 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 HAUS1Q96CS2 278 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 DYNLL2Q96FJ2 89 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ZNF799Q96GE5 643 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 PACRGQ96M98 296 aaPredicted RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 TMEM56Q96MV1 263 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 PRAP1Q96NZ9 151 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 COL21A1Q96P44 957 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 GABRG3Q99928 467 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 PRRT1Q99946 306 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 PAXXQ9BUH6 204 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 EMC6Q9BV81 110 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 POLR2J2Q9GZM3 115 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 POLR2J3Q9H1A7 115 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 DEFB127Q9H1M4 99 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 LINC00597Q9H2U6 94 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 SRMSQ9H3Y6 488 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 C12orf4Q9NQ89 552 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 RGS18Q9NS28 235 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 DDX19AQ9NUU7 478 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 AIG1Q9NVV5 245 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ST3GAL6Q9Y274 331 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ARL2BPQ9Y2Y0 163 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ARL5AQ9Y689 179 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 NPHP4O75161 1426 aaPredicted RBP2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 ZNF532Q9HCE3 1301 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 IGHV3-35A0A0C4DH35 117 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 I3L4J1 428 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 PGRMC1O00264 195 aaKnown RBP2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 UPK2O00526 184 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 TAAR5O14804 337 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 ZNF780AO75290 641 aaPredicted RBP2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 ENTPD6O75354 484 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 LYPLA2O95372 231 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 SLC25A27O95847 323 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 PTTG1O95997 202 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 IGHV3-48P01763 117 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 TCRBP04435 133 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 OR4E1P0C645 316 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 CCDC166P0CW27 439 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 ICAM2P13598 275 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 COX7A1P24310 79 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 PSMA1P25786 263 aaKnown RBP2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 PAX6P26367 422 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 IL2RGP31785 369 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 MAGEA12P43365 314 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 CYB561P49447 251 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 PSMB2P49721 201 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 P2RX1P51575 399 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 RND2P52198 227 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 APOC4P55056 127 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 HERVK_113P61574 105 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 PRR3P79522 188 aaKnown RBP2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 AESQ08117 197 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 GINS1Q14691 196 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 C16orf72Q14CZ0 275 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 OR1Q1Q15612 314 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 ZSCAN26Q16670 478 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 HIST3H3Q16695 136 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 LRRC26Q2I0M4 334 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 SMUG1Q53HV7 270 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 HHATQ5VTY9 493 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 CST9Q5W186 159 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 TNFAIP8L2Q6P589 184 aaPredicted RBP2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 FAM131AQ6UXB0 335 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 RTL4Q6ZR62 310 aa2.01□□□□□ -2.09
LAPTM4A-202ENST00000483117 MOB1BQ7L9L4 216 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms