RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 CDRT1O95170 752 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 EGR1P18146 543 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 SRMP19623 302 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 ZFP36P26651 326 aaKnown RBP10.25□□□□□ -0.77
PTPRF-213ENST00000481019 CALRP27797 417 aaKnown RBP10.25□□□□□ -0.77
PTPRF-213ENST00000481019 THBS2P35442 1172 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 DDOSTP39656 456 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 KIR3DL2P43630 455 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 BTG1P62324 171 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 PRDX4Q13162 271 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 ODF4Q2M2E3 257 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 FAM166AQ6J272 317 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 TMEM91Q6ZNR0 172 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 LRRC28Q86X40 367 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-213ENST00000481019 COMMD2Q86X83 199 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 SERPINA12Q8IW75 414 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 CELF2-AS1Q8N7Q2 184 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 OR5D14Q8NGL3 314 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 Q8TCH9 128 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 HPSE2Q8WWQ2 592 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 ITPKCQ96DU7 683 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 TIMD4Q96H15 378 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 GAL3ST1Q99999 423 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 PAPOLGQ9BWT3 736 aaKnown RBP10.25□□□□□ -0.77
PTPRF-213ENST00000481019 MMP27Q9H306 513 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 TMEM165Q9HC07 324 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 C1orf123Q9NWV4 160 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 FOXJ3Q9UPW0 622 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 A6NIN4 97 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 CST4P01036 141 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 FAHP16930 419 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF182P17025 639 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-213ENST00000481019 CCL1P22362 96 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 CD80P33681 288 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 CAPZA1P52907 286 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 PPP3R1P63098 170 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 DYNC1I2Q13409 638 aaKnown RBP10.24□□□□□ -0.77
PTPRF-213ENST00000481019 DOC2BQ14184 412 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 SPCS2Q15005 226 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF181Q2M3W8 571 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 LYPD2Q6UXB3 125 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 FTMTQ8N4E7 242 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 OR1M1Q8NGA1 313 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 OR13C3Q8NGS6 347 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 DYNC2LI1Q8TCX1 351 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 ACOT12Q8WYK0 555 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 OR5P3Q8WZ94 311 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 PIGCQ92535 297 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 TMEM106AQ96A25 262 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 SLC25A46Q96AG3 418 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 FOXRED1Q96CU9 486 aaPredicted RBP10.24□□□□□ -0.77
PTPRF-213ENST00000481019 KCTD12Q96CX2 325 aaKnown RBP10.24□□□□□ -0.77
PTPRF-213ENST00000481019 SEH1LQ96EE3 360 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 DERL3Q96Q80 235 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 OR14A2Q96R54 314 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 TSC22D3Q99576 134 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 DCUN1D5Q9BTE7 237 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 SLC22A4Q9H015 551 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 PLEKHA1Q9HB21 404 aa10.24□□□□□ -0.77
PTPRF-213ENST00000481019 FBN1P35555 2871 aaKnown RBP10.24□□□□□ -0.77
PTPRF-213ENST00000481019 LOC107986453A0A1B0GWG9 222 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 CEACAM18A8MTB9 384 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 B4DSR2 109 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 F5H0A9 414 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-213ENST00000481019 FCN3O75636 299 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 AVPP01185 164 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 MSMBP08118 114 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF20P17024 532 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 RAB3BP20337 219 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 S100A5P33763 92 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 SDC2P34741 201 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 GNALP38405 381 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 MAP2K3P46734 347 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 RPS11P62280 158 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPRF-213ENST00000481019 LCN2P80188 198 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF154Q13106 437 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 CR1LQ2VPA4 569 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF404Q494X3 552 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 CEP78Q5JTW2 689 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 FAM120AOSQ5T036 256 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 ZBTB37Q5TC79 503 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 MZT2AQ6P582 158 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 KRT74Q7RTS7 529 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 RDH10Q8IZV5 341 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 GCSAMQ8N6F7 178 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 BOLLQ8N9W6 283 aaKnown RBP10.23□□□□□ -0.77
PTPRF-213ENST00000481019 PLPP7Q8NBV4 271 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 DEFB108BQ8NET1 73 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 CSNK2A3Q8NEV1 391 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 OR14K1Q8NGZ2 314 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 OR8S1Q8NH09 359 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 NDNFQ8TB73 568 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 PP6455Q8WZ26 134 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 CPNE2Q96FN4 548 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-213ENST00000481019 TMEM246Q9BRR3 403 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 NOX4Q9NPH5 578 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 HIF1ANQ9NWT6 349 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 KCNS2Q9ULS6 477 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 V9GYS6 101 aa10.23□□□□□ -0.77
PTPRF-213ENST00000481019 A0A075B6Q4 140 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms