RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ZNF205O95201 554 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 WNT2P09544 360 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 RPS2P15880 293 aaKnown RBP10.99□□□□□ -0.65
TOP3A-205ENST00000477508 RAB3AP20336 220 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 MAPK3P27361 379 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-205ENST00000477508 CD80P33681 288 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 SOX2P48431 317 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 PPP3R1P63098 170 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 MLLT11Q13015 90 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-205ENST00000477508 TPBGQ13641 420 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 TRAM1Q15629 374 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 KCTD21Q4G0X4 260 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 ESCO2Q56NI9 601 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 DMRTC1Q5HYR2 192 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 FAM201AQ5SY85 155 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 FAM166AQ6J272 317 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 ZNF367Q7RTV3 350 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 FAM90A1Q86YD7 464 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 MKXQ8IYA7 352 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 POC1AQ8NBT0 407 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 DEFB108BQ8NET1 73 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 OR13C9Q8NGT0 318 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 OR51F2Q8NH61 342 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 TRMT10AQ8TBZ6 339 aaKnown RBP10.99□□□□□ -0.65
TOP3A-205ENST00000477508 NPRL2Q8WTW4 380 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 NEIL1Q96FI4 390 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-205ENST00000477508 SMR3AQ99954 134 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 DNTTIP1Q9H147 329 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 METTL17Q9H7H0 456 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-205ENST00000477508 DNAJB11Q9UBS4 358 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 LRCH1Q9Y2L9 728 aa10.99□□□□□ -0.65
TOP3A-205ENST00000477508 C2CD3Q4AC94 2353 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 TRAV20A0A0B4J274 112 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 PNMA8CA0A1B0GUJ8 204 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 ZNF879B4DU55 563 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 AKR7A2O43488 359 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 GPX5O75715 221 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 TGFAP01135 160 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 ALDOBP05062 364 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 MSMBP08118 114 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 HCKP08631 526 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 HSMCR30P0CW71 290 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 PGA5P0DJD9 388 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 GLRA1P23415 457 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 PSMA1P25786 263 aaKnown RBP10.98□□□□□ -0.65
TOP3A-205ENST00000477508 IL2RGP31785 369 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 NPY4RP50391 375 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 DVL1P1P54792 670 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-205ENST00000477508 RPS11P62280 158 aaKnown RBP eCLIP10.98□□□□□ -0.65
TOP3A-205ENST00000477508 KRTAP1-1Q07627 177 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 SMIM21Q3B7S5 101 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 SFRP4Q6FHJ7 346 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-205ENST00000477508 ZNF529Q6P280 563 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 SLC36A1Q7Z2H8 476 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 ANGPTL5Q86XS5 388 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 Q8IYB0 196 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 OR8B3Q8NGG8 313 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 FCGR1BQ92637 280 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 TMIGD2Q96BF3 282 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 OR8B2Q96RD0 313 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 MGLLQ99685 303 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 RHOFQ9HBH0 211 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 TMEM138Q9NPI0 162 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 ACOT13Q9NPJ3 140 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 KAAG1Q9UBP8 84 aa10.98□□□□□ -0.65
TOP3A-205ENST00000477508 PPIAL4CA0A0B4J2A2 164 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 A8MV72 311 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 RHBDL1O75783 438 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 CPEP16870 476 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 EGR1P18146 543 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 GATA3P23771 443 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 MAP2K4P45985 399 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 EMX1Q04741 257 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 HNRNPA0Q13151 305 aaKnown RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 C11orf91Q3C1V1 193 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 ATPAF1Q5TC12 328 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 ZNF773Q6PK81 442 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 GLCCI1Q86VQ1 547 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 CALHM1Q8IU99 346 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 SAXO1Q8IYX7 474 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 SPARTQ8N0X7 666 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 ZSCAN4Q8NAM6 433 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 PHYHIPQ92561 330 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 KCTD12Q96CX2 325 aaKnown RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 NRIP2Q9BQI9 281 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 GSX1Q9H4S2 264 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 KCNS2Q9ULS6 477 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 FOXJ3Q9UPW0 622 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 POLR3KQ9Y2Y1 108 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-205ENST00000477508 DOCK11Q5JSL3 2073 aa10.97□□□□□ -0.65
TOP3A-205ENST00000477508 IGKV1-27A0A075B6S5 117 aa10.96□□□□□ -0.65
TOP3A-205ENST00000477508 TRBV5-7A0A0A0MS05 114 aa10.96□□□□□ -0.65
TOP3A-205ENST00000477508 NKX6-3A6NJ46 265 aa10.96□□□□□ -0.65
TOP3A-205ENST00000477508 A8MXK9 166 aa10.96□□□□□ -0.65
TOP3A-205ENST00000477508 FAM157AC9JC47 383 aa10.96□□□□□ -0.65
TOP3A-205ENST00000477508 TNFRSF13BO14836 293 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-205ENST00000477508 ADAM20O43506 726 aa10.96□□□□□ -0.65
TOP3A-205ENST00000477508 SYNGR1O43759 233 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms