RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 ERICH4A6NGS2 130 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 TMEM212A6NML5 194 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 H3BSH0 61 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 NDUFB3O43676 98 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 CCDC159P0C7I6 412 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 PGA5P0DJD9 388 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 AMY2BP19961 511 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 GMFBP60983 142 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 IL24Q13007 206 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 MED21Q13503 144 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 CCDC58Q4VC31 144 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 ARMCX4Q5H9R4 360 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 ZNF788Q6ZQV5 615 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 USP43Q70EL4 1123 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 UTS2BQ765I0 119 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 BTN2A1Q7KYR7 527 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 ZNF676Q8N7Q3 588 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 POC1AQ8NBT0 407 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 DNAAF1Q8NEP3 725 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-205ENST00000477174 FBLIM1Q8WUP2 373 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 UPRTQ96BW1 309 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 FGGYQ96C11 551 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 PKIBQ9C010 78 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 SNTG1Q9NSN8 517 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 NUP50Q9UKX7 468 aa11.14□□□□□ -0.63
ACTN4-205ENST00000477174 EFCAB10A6NFE3 127 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 NKX6-3A6NJ46 265 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 E9PI62 339 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 FCN3O75636 299 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 ZFPL1O95159 310 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 GNAO1P09471 354 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 PSG2P11465 335 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 ZNF20P17024 532 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 MYL12AP19105 171 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 PRKACBP22694 351 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 ETV1P50549 477 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 IL13RA1P78552 427 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 CNN3Q15417 329 aaKnown RBP11.13□□□□□ -0.63
ACTN4-205ENST00000477174 SMIM21Q3B7S5 101 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 KLF17Q5JT82 389 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-205ENST00000477174 RPL22L1Q6P5R6 122 aaKnown RBP11.13□□□□□ -0.63
ACTN4-205ENST00000477174 ANGPTL5Q86XS5 388 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 OR5AK2Q8NH90 309 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 ADAT3Q96EY9 351 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-205ENST00000477174 TMEM80Q96HE8 168 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 NRIP2Q9BQI9 281 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 COMMD4Q9H0A8 199 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 CNTD2Q9H8S5 307 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 PLCXD1Q9NUJ7 323 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
ACTN4-205ENST00000477174 BABAM2Q9NXR7 383 aa11.13□□□□□ -0.63
ACTN4-205ENST00000477174 RPUSD1Q9UJJ7 312 aaKnown RBP11.13□□□□□ -0.63
ACTN4-205ENST00000477174 EXOSC1Q9Y3B2 195 aaKnown RBP11.13□□□□□ -0.63
ACTN4-205ENST00000477174 IGKV1D-17A0A075B6S4 117 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 TRBV2A0A0J9YWF9 115 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 RNF212BA8MTL3 300 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 SIGLEC5O15389 551 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 SYNGR1O43759 233 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ALX3O95076 343 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 MT-ND2P03891 347 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 PIPP12273 146 aaPredicted RBP11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ATF1P18846 271 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 GABRA2P47869 451 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 RBP2P50120 134 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ATP1B3P54709 279 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 CAV3P56539 151 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 BPIFB3P59826 476 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 FGF12P61328 243 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ERVK11-1P61568 191 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ST3GAL4Q11206 333 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ACP7Q6ZNF0 438 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 CALHM1Q8IU99 346 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 BPIFB2Q8N4F0 458 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 LY6G5BQ8NDX9 201 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 OR51A4Q8NGJ6 313 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 OR13C3Q8NGS6 347 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 TRMT10AQ8TBZ6 339 aaKnown RBP11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ST8SIA4Q92187 359 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 GGHQ92820 318 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 SPSB1Q96BD6 273 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 BORCS8Q96FH0 119 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 SDSLQ96GA7 329 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 GAFA1Q96PS6 74 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 JMJD8Q96S16 334 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 SUCNR1Q9BXA5 334 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 HES4Q9HCC6 221 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 CNOT2Q9NZN8 540 aaKnown RBP11.12□□□□□ -0.63
ACTN4-205ENST00000477174 ZNF222Q9UK12 451 aa11.12□□□□□ -0.63
ACTN4-205ENST00000477174 IGKV1-27A0A075B6S5 117 aa11.11□□□□□ -0.63
ACTN4-205ENST00000477174 IGKV1-9A0A0C4DH69 117 aa11.11□□□□□ -0.63
ACTN4-205ENST00000477174 A0A1B0GW55 424 aa11.11□□□□□ -0.63
ACTN4-205ENST00000477174 RFPL4AA6NLU0 287 aa11.11□□□□□ -0.63
ACTN4-205ENST00000477174 RFPL4AL1F8VTS6 287 aa11.11□□□□□ -0.63
ACTN4-205ENST00000477174 NXPH2O95156 264 aa11.11□□□□□ -0.63
ACTN4-205ENST00000477174 DUX4L2P0CJ85 424 aa11.11□□□□□ -0.63
ACTN4-205ENST00000477174 DUX4L3P0CJ86 424 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms