RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
RPGR-206ENST00000474584 PLEK2Q9NYT0 353 aa12.31□□□□□ -0.44
RPGR-206ENST00000474584 LSM5Q9Y4Y9 91 aaKnown RBP12.31□□□□□ -0.44
RPGR-206ENST00000474584 RTTNQ86VV8 2226 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 EIF1BO60739 113 aaKnown RBP12.3□□□□□ -0.44
RPGR-206ENST00000474584 VAMP5O95183 116 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 SCGB1D2O95969 90 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 MTCP1P56278 107 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 SPEM2Q0P670 501 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 PHYHD1Q5SRE7 291 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 ZNF385CQ66K41 422 aaPredicted RBP12.3□□□□□ -0.44
RPGR-206ENST00000474584 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 C12orf57Q99622 126 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
RPGR-206ENST00000474584 DECR2Q9NUI1 292 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 KCNIP3Q9Y2W7 256 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 DHHO43323 396 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 PIGPP57054 158 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 HIST1H3AP68431 136 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 FAM3AP98173 230 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 RSU1Q15404 277 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 HIST2H3PS2Q5TEC6 136 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 HIST2H3AQ71DI3 136 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 UBAC2Q8NBM4 344 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 OR9K2Q8NGE7 335 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 MRPL24Q96A35 216 aaKnown RBP12.3□□□□□ -0.44
RPGR-206ENST00000474584 SPSB1Q96BD6 273 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
RPGR-206ENST00000474584 KIRREL1Q96J84 757 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 SMIM3Q9BZL3 60 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 METTL9Q9H1A3 318 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 SMCO4Q9NRQ5 59 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 FAM212BQ9NTI7 297 aaPredicted RBP12.3□□□□□ -0.44
RPGR-206ENST00000474584 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 KPTNQ9Y664 436 aa12.3□□□□□ -0.44
RPGR-206ENST00000474584 MEX3AA1L020 520 aaKnown RBP12.29□□□□□ -0.44
RPGR-206ENST00000474584 DBHP09172 617 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 PNLIPP16233 465 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 CHAF1BQ13112 559 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 SHBQ15464 509 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 HMGN3Q15651 99 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 ABCA11PQ4W5N1 156 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 DHRS11Q6UWP2 260 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 PPP1R3BQ86XI6 285 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 DMBX1Q8NFW5 382 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 ZNF385AQ96PM9 386 aaKnown RBP12.29□□□□□ -0.44
RPGR-206ENST00000474584 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
RPGR-206ENST00000474584 PHF7Q9BWX1 381 aaPredicted RBP12.29□□□□□ -0.44
RPGR-206ENST00000474584 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 GPR173Q9NS66 373 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
RPGR-206ENST00000474584 IGHV3-15A0A0B4J1V0 119 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 ZNF850A8MQ14 1090 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 E5RGE8 158 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 ONECUT2O95948 504 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 OR8U9P0C7N5 309 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
RPGR-206ENST00000474584 RAET1LQ5VY80 246 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 LCN10Q6JVE6 187 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 GUSBP11Q6P575 273 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 DTX1Q86Y01 620 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 MAML2Q8IZL2 1156 aaPredicted RBP12.28□□□□□ -0.44
RPGR-206ENST00000474584 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 OR8U1Q8NH10 309 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 TOMM40LQ969M1 308 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
RPGR-206ENST00000474584 ULBP2Q9BZM5 246 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 HSF4Q9ULV5 492 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 NSG2Q9Y328 171 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 TSPAN15O95858 294 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 IFNA4P05014 189 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 CYC1P08574 325 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 DTYMKP23919 212 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 PAX6P26367 422 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 CNN3Q15417 329 aaKnown RBP12.28□□□□□ -0.44
RPGR-206ENST00000474584 SNAI3Q3KNW1 292 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 LYPD6BQ8NI32 183 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 C2CD4CQ8TF44 421 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 ESRP2Q9H6T0 727 aaKnown RBP12.28□□□□□ -0.44
RPGR-206ENST00000474584 AK3Q9UIJ7 227 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 WDR87Q6ZQQ6 2873 aa12.28□□□□□ -0.44
RPGR-206ENST00000474584 BORCS7-ASMTA0A0B4J1R7 106 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 IGHV5-10-1A0A0J9YXX1 117 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 FAM157AC9JC47 383 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 ZNF728P0DKX0 622 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 ID4P47928 161 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 RAB5BP61020 215 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 TAF9Q16594 264 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 ZFP82Q8N141 532 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 C15orf54Q8N8G6 183 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 INTS12Q96CB8 462 aaKnown RBP12.27□□□□□ -0.44
RPGR-206ENST00000474584 FAAP24Q9BTP7 215 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 NAA60Q9H7X0 242 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 RNF122Q9H9V4 155 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 COA4Q9NYJ1 87 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 LHX6Q9UPM6 363 aa12.27□□□□□ -0.44
RPGR-206ENST00000474584 FAM230AA0A1W2PPH8 454 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms