RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 KCNK17Q96T54 332 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 MED29Q9NX70 200 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 NPAP1Q9NZP6 1156 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 TIMM9Q9Y5J7 89 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 KIAA1217Q5T5P2 1943 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 A0A1W2PQM1 296 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 IQCF6A8MYZ5 107 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 H7C1C5 153 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 TM4SF5O14894 197 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 NUDT7P0C024 238 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 MGMTP16455 207 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 TNFRSF1BP20333 461 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 AGAP20933 346 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 PLA2G5P39877 138 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 BTG1P62324 171 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 FAM106AQ4KMX7 169 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 Q56UQ5 140 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 TEX30Q5JUR7 227 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 C20orf196Q8IYI0 205 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 FADS6Q8N9I5 356 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 SIGLEC12Q96PQ1 595 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 ACTR3CQ9C0K3 210 aaPredicted RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 SYNPO2LQ9H987 977 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 SIGLEC7Q9Y286 467 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 TMED3Q9Y3Q3 217 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 A0A1W2PPV9 198 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 ANGPTL7O43827 346 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 B3GALT4O96024 378 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 HLA-AP01891 365 aaKnown RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 GYPBP06028 91 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 SULT1A3P0DMM9 295 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 SULT1A4P0DMN0 295 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 HIST1H1EP10412 219 aaKnown RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 SPP1P10451 314 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 SLC2A1P11166 492 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 COX5AP20674 150 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 GCAP28676 217 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 MEOX2P50222 304 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 DAPP51397 102 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 UBE2UQ5VVX9 321 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 DCAF12L2Q5VW00 463 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 DNM1P46Q6ZS02 220 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 TMEM130Q8N3G9 435 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 PTX4Q96A99 478 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 MAP6Q96JE9 813 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 RAB40CQ96S21 281 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 FUNDC2Q9BWH2 189 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 C1QTNF6Q9BXI9 259 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 NPFFR1Q9GZQ6 430 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 PRDM14Q9GZV8 571 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 METTL17Q9H7H0 456 aaPredicted RBP4.08□□□□□ -1.76
CCNL1-215ENST00000474539 NLKQ9UBE8 527 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 INSIG2Q9Y5U4 225 aa4.08□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF729A6NN14 1252 aaPredicted RBP4.07□□□□□ -1.76
CCNL1-215ENST00000474539 OOSP1A8MZH6 123 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 PROB1E7EW31 1015 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 SELENOFO60613 162 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 RBP4P02753 201 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 PF4P02776 101 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 CELA2BP08218 269 aaPredicted RBP4.07□□□□□ -1.76
CCNL1-215ENST00000474539 GNB1P62873 340 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 MS4A2Q01362 244 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 NHLH1Q02575 133 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 MADCAM1Q13477 382 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 LTC4SQ16873 150 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 MUC15Q8N387 334 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 ZDHHC22Q8N966 263 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 TMEM229BQ8NBD8 167 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 AKR7LQ8NHP1 331 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 Q8WTZ3 238 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 PERPQ96FX8 193 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF714Q96N38 554 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 AP1S3Q96PC3 154 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 WDR61Q9GZS3 305 aaKnown RBP4.07□□□□□ -1.76
CCNL1-215ENST00000474539 EIF5A2Q9GZV4 153 aaKnown RBP4.07□□□□□ -1.76
CCNL1-215ENST00000474539 TUBB1Q9H4B7 451 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 CLEC5AQ9NY25 188 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 SLC25A10Q9UBX3 287 aaPredicted RBP4.07□□□□□ -1.76
CCNL1-215ENST00000474539 NTNG1Q9Y2I2 539 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 RAXQ9Y2V3 346 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 PLXNA1Q9UIW2 1896 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 FOCADQ5VW36 1801 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 ATP6V1G1O75348 118 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 SMIM10L1P0DMW3 83 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 PTNP21246 168 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 ACKR3P25106 362 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 RFC3P40938 356 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 UCP2P55851 309 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 MRPS11P82912 194 aaKnown RBP4.07□□□□□ -1.76
CCNL1-215ENST00000474539 PPP1R8Q12972 351 aaKnown RBP4.07□□□□□ -1.76
CCNL1-215ENST00000474539 C3orf36Q3SXR2 165 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 AKIRIN2Q53H80 203 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 TMEM236Q5W0B7 351 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 OR2T2Q6IF00 324 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 B3GNT8Q7Z7M8 397 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF561Q8N587 486 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 BHLHE23Q8NDY6 225 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 OR4A4PQ8NGN8 299 aa4.07□□□□□ -1.76
CCNL1-215ENST00000474539 MRGPRDQ8TDS7 321 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms