RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TEX29Q8N6K0 151 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 ZNF671Q8TAW3 534 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 ST8SIA4Q92187 359 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 TFAP2CQ92754 450 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 FGGYQ96C11 551 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 C10orf35Q96D05 121 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 VCXQ9H320 206 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 ZNF222Q9UK12 451 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 HHLA2Q9UM44 414 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 DIMT1Q9UNQ2 313 aaKnown RBP15.69■□□□□ 0.1
PTCD3-210ENST00000473829 OR2AT4A6NND4 320 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 ENSAO43768 121 aaKnown RBP15.68■□□□□ 0.1
PTCD3-210ENST00000473829 XPNPEP2O43895 674 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 GATBO75879 557 aaKnown RBP15.68■□□□□ 0.1
PTCD3-210ENST00000473829 RGS9O75916 674 aaPredicted RBP15.68■□□□□ 0.1
PTCD3-210ENST00000473829 ZFPL1O95159 310 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 PSG2P11465 335 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 DCKP27707 260 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 AQP4P55087 323 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 FGF12P61328 243 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 IKZF1Q13422 519 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 DGUOKQ16854 277 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 ARMCX4Q5H9R4 360 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 BTN2A1Q7KYR7 527 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 SLC36A1Q7Z2H8 476 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 EGFL6Q8IUX8 553 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 ZNF676Q8N7Q3 588 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 PP6455Q8WZ26 134 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 GGHQ92820 318 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 TMIGD2Q96BF3 282 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 MYCBPQ99417 103 aaPredicted RBP15.68■□□□□ 0.1
PTCD3-210ENST00000473829 PDCD1LG2Q9BQ51 273 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 CLEC2DQ9UHP7 191 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 SLC7A11Q9UPY5 501 aa15.68■□□□□ 0.1
PTCD3-210ENST00000473829 NKX6-3A6NJ46 265 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 IGHV4-38-2P0DP08 117 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 GBX2P52951 348 aaPredicted RBP15.67■□□□□ 0.1
PTCD3-210ENST00000473829 KRTAP24-1Q3LI83 254 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 CD276Q5ZPR3 534 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 ACP7Q6ZNF0 438 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 OR13C3Q8NGS6 347 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 C22orf15Q8WYQ4 148 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 RGP1Q92546 391 aaPredicted RBP15.67■□□□□ 0.1
PTCD3-210ENST00000473829 UPRTQ96BW1 309 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 SLC6A7Q99884 636 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 NRIP2Q9BQI9 281 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 DNTTIP1Q9H147 329 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 OCEL1Q9H607 264 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 POLDIP2Q9Y2S7 368 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 CAB39Q9Y376 341 aaPredicted RBP15.67■□□□□ 0.1
PTCD3-210ENST00000473829 COL6A5A8TX70 2615 aa15.67■□□□□ 0.1
PTCD3-210ENST00000473829 IGHV3OR16-10A0A075B7F0 116 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 IRGMA1A4Y4 181 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 SIGLEC5O15389 551 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 TCF21O43680 179 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 NOS1APO75052 506 aaPredicted RBP15.66■□□□□ 0.1
PTCD3-210ENST00000473829 LALBAP00709 142 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 PLATP00750 562 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 ZNF20P17024 532 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 FUT6P51993 359 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 IL24Q13007 206 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 MRPL28Q13084 256 aaKnown RBP15.66■□□□□ 0.1
PTCD3-210ENST00000473829 CNN3Q15417 329 aaKnown RBP15.66■□□□□ 0.1
PTCD3-210ENST00000473829 UTS2BQ765I0 119 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 RNF144BQ7Z419 303 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 OR5AK2Q8NH90 309 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 RPS4Y2Q8TD47 263 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 TMEM80Q96HE8 168 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 PKIBQ9C010 78 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 HES4Q9HCC6 221 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 ZNF69Q9UC07 566 aa15.66■□□□□ 0.1
PTCD3-210ENST00000473829 EXOSC1Q9Y3B2 195 aaKnown RBP15.66■□□□□ 0.1
PTCD3-210ENST00000473829 SIRT4Q9Y6E7 314 aaPredicted RBP15.66■□□□□ 0.1
PTCD3-210ENST00000473829 TRAV40A0A0B4J280 105 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 TMEM212A6NML5 194 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 F8VVB4 439 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 F8VWA3 439 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 NDUFB3O43676 98 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 VENTXO95231 258 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 SERPINA3P01011 423 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 SFTPBP07988 381 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 ACAA1P09110 424 aaPredicted RBP15.65■□□□□ 0.1
PTCD3-210ENST00000473829 CCDC159P0C7I6 412 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 PPIAL4GP0DN37 164 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 PIPP12273 146 aaPredicted RBP15.65■□□□□ 0.1
PTCD3-210ENST00000473829 MMP9P14780 707 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 ATF1P18846 271 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 AZGP1P25311 298 aaKnown RBP15.65■□□□□ 0.1
PTCD3-210ENST00000473829 GABRA2P47869 451 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 CEBPDP49716 269 aaPredicted RBP15.65■□□□□ 0.1
PTCD3-210ENST00000473829 ERVK11-1P61568 191 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 IL13RA1P78552 427 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 ST3GAL4Q11206 333 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 DOC2BQ14184 412 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 CDK5R1Q15078 307 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 CD177Q8N6Q3 437 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 OR13C9Q8NGT0 318 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 BORCS8Q96FH0 119 aa15.65■□□□□ 0.1
PTCD3-210ENST00000473829 ELL3Q9HB65 397 aaPredicted RBP15.65■□□□□ 0.1
PTCD3-210ENST00000473829 RASL12Q9NYN1 266 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms