RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 LRRC10Q5BKY1 277 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 USP43Q70EL4 1123 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 CALHM1Q8IU99 346 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 BCL6BQ8N143 479 aaPredicted RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 BPIFB2Q8N4F0 458 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 PNLDC1Q8NA58 520 aaKnown RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 POC1AQ8NBT0 407 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 SETD9Q8NE22 299 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 SPATA3Q8NHX4 192 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 NPRL2Q8WTW4 380 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 PP6455Q8WZ26 134 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 FGGYQ96C11 551 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 ADAT3Q96EY9 351 aaPredicted RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 MED30Q96HR3 178 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 ZNF488Q96MN9 340 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 GAFA1Q96PS6 74 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 SLC6A7Q99884 636 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 SUCNR1Q9BXA5 334 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 CNTD2Q9H8S5 307 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 FGF20Q9NP95 211 aaPredicted RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 ZNF69Q9UC07 566 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 NKX1-2Q9UD57 310 aaPredicted RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 SONP18583 2426 aaKnown RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 IGKV1D-17A0A075B6S4 117 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 NKX6-3A6NJ46 265 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 OR4C45A6NMZ5 311 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 ZNF879B4DU55 563 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 H0YAE9 185 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 GPR37O15354 613 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 SIGLEC5O15389 551 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 NOS1APO75052 506 aaPredicted RBP7.57□□□□□ -1.2
SYN3-211ENST00000472027 TOX4O94842 621 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 LIMS3P0CW19 117 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 LIMS4P0CW20 117 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 PGA5P0DJD9 388 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 IGHV4-38-2P0DP08 117 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 SELLP14151 372 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 MPZP25189 248 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 DCKP27707 260 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 CAPGP40121 348 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 GBX2P52951 348 aaPredicted RBP7.57□□□□□ -1.2
SYN3-211ENST00000472027 HILS1P60008 231 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 ARF6P62330 175 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 IL13RA1P78552 427 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 SLC34A1Q06495 639 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 IL24Q13007 206 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 MRPL28Q13084 256 aaKnown RBP7.57□□□□□ -1.2
SYN3-211ENST00000472027 IL18R1Q13478 541 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 DGUOKQ16854 277 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 ACP7Q6ZNF0 438 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 BATF2Q8N1L9 274 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 ZNF676Q8N7Q3 588 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 LY6G5BQ8NDX9 201 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 OR51A4Q8NGJ6 313 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 OR10AC1Q8NH08 325 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 BORCS8Q96FH0 119 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 WDFY2Q96P53 400 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 PCGF1Q9BSM1 259 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 C19orf24Q9BVV8 132 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 JAM3Q9BX67 310 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 PKIBQ9C010 78 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 CHST5Q9GZS9 411 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 MS4A7Q9GZW8 240 aaPredicted RBP7.57□□□□□ -1.2
SYN3-211ENST00000472027 RPUSD1Q9UJJ7 312 aaKnown RBP7.57□□□□□ -1.2
SYN3-211ENST00000472027 ZNF222Q9UK12 451 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 HHLA2Q9UM44 414 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 POLDIP2Q9Y2S7 368 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 MAB21L2Q9Y586 359 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 HSPE1-MOB4S4R3N1 261 aa7.57□□□□□ -1.2
SYN3-211ENST00000472027 IGKV1-27A0A075B6S5 117 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 TRAV40A0A0B4J280 105 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 IGKV1-9A0A0C4DH69 117 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 TRBV2A0A0J9YWF9 115 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 IRGMA1A4Y4 181 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 ERICH4A6NGS2 130 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 RFPL4AA6NLU0 287 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 RFPL4AL1F8VTS6 287 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 NXPH2O95156 264 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 ZFPL1O95159 310 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 PLATP00750 562 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 SFTPBP07988 381 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 GNAO1P09471 354 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 MMP9P14780 707 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 ZNF20P17024 532 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 ATF1P18846 271 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 PRDX2P32119 198 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 RBP2P50120 134 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 ETV1P50549 477 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 GTF2A1P52655 376 aaPredicted RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 ATP1B3P54709 279 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 METTL11BQ5VVY1 283 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 UTS2BQ765I0 119 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 C8orf59Q8N0T1 100 aaPredicted RBP7.56□□□□□ -1.2
SYN3-211ENST00000472027 SIGLECL1Q8N7X8 197 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 ZNRF1Q8ND25 227 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 DNAAF1Q8NEP3 725 aa7.56□□□□□ -1.2
SYN3-211ENST00000472027 OR13C3Q8NGS6 347 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms