RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SFRP4Q6FHJ7 346 aaPredicted RBP12.65□□□□□ -0.38
SNX13-205ENST00000471744 GLCCI1Q86VQ1 547 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 NPRL2Q8WTW4 380 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
SNX13-205ENST00000471744 SGCDQ92629 289 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 NEIL1Q96FI4 390 aaPredicted RBP12.65□□□□□ -0.38
SNX13-205ENST00000471744 PGLYRP3Q96LB9 341 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 OPALINQ96PE5 141 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 METTL17Q9H7H0 456 aaPredicted RBP12.65□□□□□ -0.38
SNX13-205ENST00000471744 ISYNA1Q9NPH2 558 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 YAE1D1Q9NRH1 226 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 TMEM160Q9NX00 188 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 DNAJB11Q9UBS4 358 aa12.65□□□□□ -0.38
SNX13-205ENST00000471744 LSM2Q9Y333 95 aaKnown RBP12.65□□□□□ -0.38
SNX13-205ENST00000471744 NSD1Q96L73 2696 aaPredicted RBP12.65□□□□□ -0.38
SNX13-205ENST00000471744 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.39
SNX13-205ENST00000471744 TRAV20A0A0B4J274 112 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 A8MXK9 166 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 SULT1B1O43704 296 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 NOS1APO75052 506 aaPredicted RBP12.64□□□□□ -0.39
SNX13-205ENST00000471744 CYB5AP00167 134 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 WNT2P09544 360 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 EGR1P18146 543 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 RAB3AP20336 220 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 GLRA1P23415 457 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 MAPK3P27361 379 aaPredicted RBP12.64□□□□□ -0.39
SNX13-205ENST00000471744 NPY4RP50391 375 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 SMIM21Q3B7S5 101 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 FAM90A1Q86YD7 464 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 ZFP41Q8N8Y5 198 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 OR13C9Q8NGT0 318 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 TMEM106AQ96A25 262 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 TMIGD2Q96BF3 282 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 OR5M11Q96RB7 305 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 DNTTIP1Q9H147 329 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 KAAG1Q9UBP8 84 aa12.64□□□□□ -0.39
SNX13-205ENST00000471744 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 IGKV1-9A0A0C4DH69 117 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 MAGEB3O15480 346 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 AKR7A2O43488 359 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 RHBDL1O75783 438 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 PGA5P0DJD9 388 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 GATA3P23771 443 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 RBMXP38159 391 aaKnown RBP12.63□□□□□ -0.39
SNX13-205ENST00000471744 SOX2P48431 317 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 MTCP1P56278 107 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 PPP3R1P63098 170 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 SLC36A1Q7Z2H8 476 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 MKXQ8IYA7 352 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 Q8IYB0 196 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 UFD1Q92890 307 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 TMEM186Q96B77 213 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 SSBP3Q9BWW4 388 aaPredicted RBP12.63□□□□□ -0.39
SNX13-205ENST00000471744 CKLFQ9UBR5 152 aa12.63□□□□□ -0.39
SNX13-205ENST00000471744 POLR3KQ9Y2Y1 108 aaPredicted RBP12.63□□□□□ -0.39
SNX13-205ENST00000471744 FN1P02751 2386 aaKnown RBP12.63□□□□□ -0.39
SNX13-205ENST00000471744 NAV3Q8IVL0 2385 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 PNMA8CA0A1B0GUJ8 204 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 NKX6-3A6NJ46 265 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.62□□□□□ -0.39
SNX13-205ENST00000471744 TNFRSF13BO14836 293 aaPredicted RBP12.62□□□□□ -0.39
SNX13-205ENST00000471744 ADAM20O43506 726 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 HCKP08631 526 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 PITPNBP48739 271 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 RPS11P62280 158 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNX13-205ENST00000471744 GNB2P62879 340 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
SNX13-205ENST00000471744 C11orf91Q3C1V1 193 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 ATPAF1Q5TC12 328 aaPredicted RBP12.62□□□□□ -0.39
SNX13-205ENST00000471744 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 Q71RC1 249 aaPredicted RBP12.62□□□□□ -0.39
SNX13-205ENST00000471744 ZNF367Q7RTV3 350 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 ANGPTL5Q86XS5 388 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 CALHM1Q8IU99 346 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 C19orf18Q8NEA5 215 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 NRIP2Q9BQI9 281 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 NLKQ9UBE8 527 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 CLN8Q9UBY8 286 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 LRRC42Q9Y546 428 aa12.62□□□□□ -0.39
SNX13-205ENST00000471744 IGKV1-27A0A075B6S5 117 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 A0A0G2JMP0 313 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 A0A0X1KG70 313 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 ZNF879B4DU55 563 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 SYNGR1O43759 233 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 GPX5O75715 221 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 NXPH2O95156 264 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 GYPAP02724 150 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 ALDOBP05062 364 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 HSMCR30P0CW71 290 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 FSTP19883 344 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 HNF1AP20823 631 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 TPBGQ13641 420 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 TRAM1Q15629 374 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 STUMQ69YW2 141 aa12.61□□□□□ -0.39
SNX13-205ENST00000471744 ACP7Q6ZNF0 438 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms