RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 COA3Q9Y2R0 106 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 A0A1W2PQD3 144 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 A6NLC8 198 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 PLPP3O14495 311 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 PPIHO43447 177 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 NSA2O95478 260 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 TSPAN15O95858 294 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 IFNA17P01571 189 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OR8U9P0C7N5 309 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 SEC11BP0C7V7 166 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 FOSL1P15407 271 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 ST6GAL1P15907 406 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 HIST1H1DP16402 221 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF708P17019 499 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RPL12P30050 165 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 THBS4P35443 961 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 NPY4RP50391 375 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RAB5CP51148 216 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 P2RY4P51582 365 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF117Q03924 483 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 ETV3LQ6ZN32 361 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 DCXRQ7Z4W1 244 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OR5H2Q8NGV7 314 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OR8U1Q8NH10 309 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 KCNG3Q8TAE7 436 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 CT55Q8WUE5 264 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RNF133Q8WVZ7 376 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RAB3CQ96E17 227 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF285Q96NJ3 590 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 MESP1Q9BRJ9 268 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 SMDT1Q9H4I9 107 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 PLEKHA2Q9HB19 425 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 FAM60AQ9NP50 221 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 FAM206AQ9NX38 181 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RARRES3Q9UL19 164 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 FLNCQ14315 2725 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 A0A1B0GW64 132 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 TLCD2A6NGC4 264 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 FRG2CA6NGY1 282 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 NPIPB13A6NJU9 1138 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 A8MVM7 634 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 NPIPB4C9JG80 1138 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 K7EPK0 472 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 AGPAT2O15120 278 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 TTRP02766 147 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 SNRNP70P08621 437 aaKnown RBP8.41□□□□□ -1.06
HDAC3-205ENST00000469550 H2BFMP0C1H6 154 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 PGCP20142 388 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF93P35789 620 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ECI1P42126 302 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF84P51523 738 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 SLC37A1P57057 533 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 SLC26A5P58743 744 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 RAB2AP61019 212 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 SSTP61278 116 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ACY1Q03154 408 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 GUK1Q16774 197 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ACER2Q5QJU3 275 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 AADACL3Q5VUY0 350 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 C1orf140Q5VVS0 124 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-205ENST00000469550 FAM71E2Q8N5Q1 922 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 SLC25A36Q96CQ1 311 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ADAT3Q96EY9 351 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-205ENST00000469550 PSMG3-AS1Q96PY0 264 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 KLHDC3Q9BQ90 382 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 C1orf123Q9NWV4 160 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 TREM2Q9NZC2 230 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 A0A0A6YYD4 124 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 IGHV5-51A0A0C4DH38 117 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 A0A1W2PPH5 198 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 CDC14CA4D256 554 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 K7EM74 188 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 TXNL1O43396 289 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 SYT7O43581 403 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 DEDDO75618 318 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 MPZL1O95297 269 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 TIAF1O95411 115 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 HOXB5P09067 269 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 DANCRP0C864 163 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 NQO2P16083 231 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 HOXA5P20719 270 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 LMO1P25800 156 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 FCGR2CP31995 323 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 GNALP38405 381 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 POLR2HP52434 150 aaKnown RBP8.41□□□□□ -1.06
HDAC3-205ENST00000469550 TAS2R46P59540 309 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 DCAF7P61962 342 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ZP4Q12836 540 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 ERV3-1Q14264 604 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 PLAC9Q5JTB6 97 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 KRBOX4Q5JUW0 171 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 COX15Q7KZN9 410 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 D2HGDHQ8N465 521 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 OR56B1Q8NGI3 324 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 OR13G1Q8NGZ3 307 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 C1orf147Q96MC9 270 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-205ENST00000469550 IP6K3Q96PC2 410 aa8.41□□□□□ -1.06
HDAC3-205ENST00000469550 GGACTQ9BVM4 153 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms