RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FAM71F1Q96KD3 344 aaPredicted RBP5.9□□□□□ -1.47
SCAF4-204ENST00000467731 PDCD10Q9BUL8 212 aa5.9□□□□□ -1.47
SCAF4-204ENST00000467731 FUNDC2Q9BWH2 189 aa5.9□□□□□ -1.47
SCAF4-204ENST00000467731 HSPB11Q9Y547 144 aa5.9□□□□□ -1.47
SCAF4-204ENST00000467731 U3KQ87 197 aa5.9□□□□□ -1.47
SCAF4-204ENST00000467731 CSMD1Q96PZ7 3565 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 A6NIN4 97 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 GPX5O75715 221 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 SC5DO75845 299 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 NKX6-1P78426 367 aaPredicted RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 FABP5Q01469 135 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 VHLLQ6RSH7 139 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 PGAP1Q75T13 922 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 MS4A15Q8N5U1 240 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 KBTBD8Q8NFY9 601 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OR10J5Q8NHC4 309 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 TSEN15Q8WW01 171 aaKnown RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 RPL3LQ92901 407 aaKnown RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 SPSB4Q96A44 273 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 PIK3IP1Q96FE7 263 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 TRMT61AQ96FX7 289 aaKnown RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 HS3ST6Q96QI5 342 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OR14A2Q96R54 314 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 REPIN1Q9BWE0 567 aaKnown RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OR51E2Q9H255 320 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 RGCCQ9H4X1 137 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 ZNF391Q9UJN7 358 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 FZR1Q9UM11 496 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 HHLA2Q9UM44 414 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 ARFGEF3Q5TH69 2177 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 hCG_38984A0A1B0GV85 526 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 A0A1B0GVI7 797 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 SHISA9B4DS77 424 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 GABRPO00591 440 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 LMX1BO60663 402 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 DHRS3O75911 302 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 PLAUP00749 431 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OPN1MWP04001 364 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 HLA-DPB1P04440 258 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 CD3EP07766 207 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OPN1MW2P0DN77 364 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OPN1MW3P0DN78 364 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 ACHEP22303 614 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 CCL1P22362 96 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 GADD45AP24522 165 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 ACKR3P25106 362 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 GLRXP35754 106 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 CRYBB2P43320 205 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 SOX2P48431 317 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 FAM3AP98173 230 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 SMCO1Q147U7 214 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 BAK1Q16611 211 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OR2B11Q5JQS5 317 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 MZT2AQ6P582 158 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 DOK3Q7L591 496 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 OVCH2Q7RTZ1 564 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 MRPL21Q7Z2W9 205 aaKnown RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 ACBD4Q8NC06 268 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 SLC24A4Q8NFF2 622 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 KLF14Q8TD94 323 aaPredicted RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 GPR148Q8TDV2 347 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 TMEM106AQ96A25 262 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 MARS2Q96GW9 593 aaKnown RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 TCEAL7Q9BRU2 100 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 UNKLQ9H9P5 680 aaKnown RBP5.89□□□□□ -1.47
SCAF4-204ENST00000467731 CA10Q9NS85 328 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 RDH8Q9NYR8 311 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 TREM2Q9NZC2 230 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 CACNA1DQ01668 2161 aa5.89□□□□□ -1.47
SCAF4-204ENST00000467731 LOC100506127A0A0U1RQW1 187 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 A0A1W2PPK0 400 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 MPTX1A8MV57 137 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 DNASE2O00115 360 aaPredicted RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 NDUFS8O00217 210 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 LDLRAD4O15165 306 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PLATP00750 562 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 LOXP28300 417 aaPredicted RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 BMI1P35226 326 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 MPV17P39210 176 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FABP6P51161 128 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 SNRPD2P62316 118 aaKnown RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TRAM1Q15629 374 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 CTF1Q16619 201 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 MSMPQ1L6U9 139 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 Q499Y3 187 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 ACSM3Q53FZ2 586 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TMEM255AQ5JRV8 349 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FAM27D1Q5T7N8 215 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 LAMTOR1Q6IAA8 161 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 RGS7BPQ6MZT1 257 aaPredicted RBP5.88□□□□□ -1.47
SCAF4-204ENST00000467731 CD200R1LQ6Q8B3 271 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FBXW12Q6X9E4 464 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TMEM91Q6ZNR0 172 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 PLPP7Q8NBV4 271 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 BHLHE23Q8NDY6 225 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 NUP37Q8NFH4 326 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 OR13C3Q8NGS6 347 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 OR14K1Q8NGZ2 314 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 FAM222BQ8WU58 562 aa5.88□□□□□ -1.47
SCAF4-204ENST00000467731 TMEM171Q8WVE6 324 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms