RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 RBM48Q5RL73 367 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR2G6Q5TZ20 316 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RHBDD2Q6NTF9 364 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 UQCC3Q6UW78 93 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CD164L2Q6UWJ8 174 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 UNQ9370/PRO34162Q6UXP9 181 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF620Q6ZNG0 422 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MOB2Q70IA6 237 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SERPINA12Q8IW75 414 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SVBPQ8N300 66 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 Q8N402 240 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MS4A15Q8N5U1 240 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 C15orf54Q8N8G6 183 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 UBAC2Q8NBM4 344 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 PROKR2Q8NFJ6 384 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR11H1Q8NG94 326 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR5L1Q8NGL2 311 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR9A4Q8NGU2 314 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR11H2Q8NH07 326 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR4S2Q8NH73 311 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MCFD2Q8NI22 146 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RHEBL1Q8TAI7 183 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RXFP4Q8TDU9 374 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 ORAOV1Q8WV07 137 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 APH1BQ8WW43 257 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 DNAJB3Q8WWF6 145 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 LCN9Q8WX39 176 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 ASB17Q8WXJ9 295 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SMARCD2Q92925 531 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM45BQ96B21 275 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MRPS24Q96EL2 167 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CXorf58Q96LI9 332 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TSSK3Q96PN8 268 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 OR2M2Q96R28 347 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 NPY6RQ99463 290 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 FUNDC2Q9BWH2 189 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CHST5Q9GZS9 411 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MAGT1Q9H0U3 335 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 WFDC1Q9HC57 220 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 ISYNA1Q9NPH2 558 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MIEF1Q9NQG6 463 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 SLC2A9Q9NRM0 540 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RASL12Q9NYN1 266 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 STOX2Q9P2F5 926 aaPredicted RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MRM2Q9UI43 246 aaKnown RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CD84Q9UIB8 345 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 FLVCR2Q9UPI3 526 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 POMPQ9Y244 141 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 V9GYS6 101 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 MROH2AA6NES4 1674 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 CPS1P31327 1500 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 TOPBP1Q92547 1522 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 LTN1O94822 1766 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 COL22A1Q8NFW1 1626 aaPredicted RBP2.71□□□□□ -1.98
VPS13D-203ENST00000466732 RAPGEF6Q8TEU7 1601 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 ARHGAP23Q9P227 1491 aa2.71□□□□□ -1.98
VPS13D-203ENST00000466732 DLG5Q8TDM6 1919 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 FAM208AQ9UK61 1670 aaKnown RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 DCCP43146 1447 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CITO14578 2027 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ABCC1P33527 1531 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 IGKV6D-21A0A0A0MT36 114 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 NPIPA5A0A0B4J1W7 369 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM213A2RRL7 107 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM218A2RU14 115 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TRIM49D1C9J1S8 452 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ANKRD63C9JTQ0 380 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 NPIPA5E9PKD4 350 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 F6UZH7 168 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TRAPPC2LH3BP13 241 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 M0R036 132 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 MYL12BO14950 172 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SIVA1O15304 175 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 B4GALT5O43286 388 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PRKAB2O43741 272 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ICOSLGO75144 302 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TNFSF15O95150 251 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 GJB5O95377 273 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 NUDT14O95848 222 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 TSPAN13O95857 204 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 MT-CO2P00403 227 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CST4P01036 141 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 IGHV3-9P01782 118 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 C1QCP02747 245 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ARG1P05089 322 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 BPGMP07738 259 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 ALPIP09923 528 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 OR8U9P0C7N5 309 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 PNMTP11086 282 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 LAMP1P11279 417 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 FOLR1P15328 257 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 RCC1P18754 421 aaPredicted RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 MYL12AP19105 171 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CXCR1P25024 350 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 SSTR5P35346 364 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 COILP38432 576 aaPredicted RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 RPS9P46781 194 aaKnown RBP2.7□□□□□ -1.98
VPS13D-203ENST00000466732 LGALS7P47929 136 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 RFX3P48380 749 aa2.7□□□□□ -1.98
VPS13D-203ENST00000466732 CSNK1A1P48729 337 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms