RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 BATF2Q8N1L9 274 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 OR5T2Q8NGG2 359 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 OR51A4Q8NGJ6 313 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 ZNF671Q8TAW3 534 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 AQP3Q92482 292 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 ADAT3Q96EY9 351 aaPredicted RBP8.42□□□□□ -1.06
RFX3-210ENST00000457373 BORCS8Q96FH0 119 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 FAHD2AQ96GK7 314 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 CNBD2Q96M20 576 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 PDCD1LG2Q9BQ51 273 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 TRIM36Q9NQ86 728 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 SNTG1Q9NSN8 517 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 BABAM2Q9NXR7 383 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 SCN3BQ9NY72 215 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 DNAJB11Q9UBS4 358 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 DOCK11Q5JSL3 2073 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 ABCA2Q9BZC7 2435 aa8.42□□□□□ -1.06
RFX3-210ENST00000457373 PQLC2LA1A4F0 135 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 TMEM212A6NML5 194 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 TRAPPC2LH3BP13 241 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 MYL12BO14950 172 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 SYNGR1O43759 233 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 ZFPL1O95159 310 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 FSTL3O95633 263 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 LALBAP00709 142 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 OCM2P0CE71 109 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 OCMP0CE72 109 aaPredicted RBP8.41□□□□□ -1.06
RFX3-210ENST00000457373 ATF1P18846 271 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 PCMT1P22061 227 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 PITPNBP48739 271 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 FUT6P51993 359 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 CDK5R1Q15078 307 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 CNN3Q15417 329 aaKnown RBP8.41□□□□□ -1.06
RFX3-210ENST00000457373 MICBQ29980 383 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 DCAF12L2Q5VW00 463 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 TEX36Q5VZQ5 186 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 FAM90A1Q86YD7 464 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 ZNF573Q86YE8 665 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 ZFP41Q8N8Y5 198 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 OR52N1Q8NH53 320 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 HAVCR2Q8TDQ0 301 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 TSEN15Q8WW01 171 aaKnown RBP8.41□□□□□ -1.06
RFX3-210ENST00000457373 PP6455Q8WZ26 134 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 C10orf35Q96D05 121 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 ZNF488Q96MN9 340 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 CCL13Q99616 98 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 SSBP3Q9BWW4 388 aaPredicted RBP8.41□□□□□ -1.06
RFX3-210ENST00000457373 ANKRD60Q9BZ19 345 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 CHST5Q9GZS9 411 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 WDR13Q9H1Z4 485 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 FKBP14Q9NWM8 211 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 CTSZQ9UBR2 303 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 CLN8Q9UBY8 286 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 DHDHQ9UQ10 334 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 LRCH1Q9Y2L9 728 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 TPRKBQ9Y3C4 175 aa8.41□□□□□ -1.06
RFX3-210ENST00000457373 SIRT4Q9Y6E7 314 aaPredicted RBP8.41□□□□□ -1.06
RFX3-210ENST00000457373 CSPG4Q6UVK1 2322 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 PNMA8CA0A1B0GUJ8 204 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.4□□□□□ -1.06
RFX3-210ENST00000457373 J3QT63 122 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 TNFRSF13BO14836 293 aaPredicted RBP8.4□□□□□ -1.06
RFX3-210ENST00000457373 OGG1O15527 345 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 NDUFA2O43678 99 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 PLATP00750 562 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 TFF1P04155 84 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 CDK1P06493 297 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 MUC1P15941 1255 aaPredicted RBP8.4□□□□□ -1.06
RFX3-210ENST00000457373 HNF1AP20823 631 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 AZGP1P25311 298 aaKnown RBP8.4□□□□□ -1.06
RFX3-210ENST00000457373 CFHR2P36980 270 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 SRP14P37108 136 aaKnown RBP8.4□□□□□ -1.06
RFX3-210ENST00000457373 SOX2P48431 317 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 ATP1B3P54709 279 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 CCDC58Q4VC31 144 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 WDR25Q64LD2 544 aaPredicted RBP8.4□□□□□ -1.06
RFX3-210ENST00000457373 CALHM1Q8IU99 346 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 NANOGP1Q8N7R0 232 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 OR13C9Q8NGT0 318 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 SGCDQ92629 289 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 MYDGFQ969H8 173 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 TMIGD2Q96BF3 282 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 TECTBQ96PL2 329 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 MMP26Q9NRE1 261 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 LPAR3Q9UBY5 353 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 OR5V1Q9UGF6 321 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 CDC42EP3Q9UKI2 254 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 RAB26Q9ULW5 256 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 ERGIC3Q9Y282 383 aa8.4□□□□□ -1.06
RFX3-210ENST00000457373 IGKV1-27A0A075B6S5 117 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 IGKV1-9A0A0C4DH69 117 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 A0A0G2JMP0 313 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 A0A0X1KG70 313 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 A0A1B0GW55 424 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 KIAA1324LA8MWY0 1029 aaPredicted RBP8.39□□□□□ -1.07
RFX3-210ENST00000457373 A8MXK9 166 aa8.39□□□□□ -1.07
RFX3-210ENST00000457373 RPSAP08865 295 aaKnown RBP8.39□□□□□ -1.07
RFX3-210ENST00000457373 DUX4L2P0CJ85 424 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms