RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 MICU1Q9BPX6 476 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 FOXJ2Q9P0K8 574 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 FOXD3Q9UJU5 478 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-202ENST00000451716 TP53TG5Q9Y2B4 290 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 ARID1AO14497 2285 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF407Q9C0G0 2248 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 HSBP1L1C9JCN9 74 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 MCRIP1C9JLW8 97 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 CCSO14618 274 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 CDC14BO60729 498 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 POU3F2P20265 443 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-202ENST00000451716 TMEM50BP56557 158 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 SORDQ00796 357 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 DHRS2Q13268 280 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 UBE2V2Q15819 145 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 LBHQ53QV2 105 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-202ENST00000451716 PGAP1Q75T13 922 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 GGNQ86UU5 652 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 SLAMF9Q96A28 289 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 SLC25A21Q9BQT8 299 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-202ENST00000451716 GGACTQ9BVM4 153 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 TMEM59Q9BXS4 323 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 MED13Q9UHV7 2174 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 FREM1Q5H8C1 2179 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 C9orf172C9J069 976 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 M0R135 149 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 RAD51DO75771 328 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 DIRAS3O95661 229 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 B4GALT1P15291 398 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 CCL1P22362 96 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 CLDN15P56746 228 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 FABP9Q0Z7S8 132 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 SLC25A24Q6NUK1 477 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 HSD17B13Q7Z5P4 300 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-202ENST00000451716 PIGTQ969N2 578 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF799Q96GE5 643 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 ARHGAP5-AS1Q96IT6 56 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 OR2AT4A6NND4 320 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 HLA-AP01891 365 aaKnown RBP10.56□□□□□ -0.72
COL27A1-202ENST00000451716 GDF1P27539 372 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 SRD5A2P31213 254 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 RAC3P60763 192 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 SEC61A1P61619 476 aaKnown RBP10.56□□□□□ -0.72
COL27A1-202ENST00000451716 KISS1Q15726 138 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 CRIP3Q6Q6R5 217 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 OR10D3Q8NH80 312 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 PSMF1Q92530 271 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 S100PBPQ96BU1 408 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 RAB3CQ96E17 227 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 ATG101Q9BSB4 218 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 CST11Q9H112 138 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 ELL3Q9HB65 397 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-202ENST00000451716 DNAJB11Q9UBS4 358 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 PIGLQ9Y2B2 252 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 FLVCR1Q9Y5Y0 555 aa10.56□□□□□ -0.72
COL27A1-202ENST00000451716 EP300Q09472 2414 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-202ENST00000451716 TMEM210A6NLX4 147 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 DISC1C4P0D8 188 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ZNHIT1O43257 154 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 SLC34A2O95436 690 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 MELTFP08582 738 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 CASRP41180 1078 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 CYB561P49447 251 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 RAB5BP61020 215 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 LRRC37A5PQ49AS3 106 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 LY6G6FQ5SQ64 297 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF774Q6NX45 483 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 C20orf196Q8IYI0 205 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 STEAP2Q8NFT2 490 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ABHD3Q8WU67 409 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 MAFIPQ8WZ33 124 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 SEC22AQ96IW7 307 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 THOC3Q96J01 351 aaKnown RBP10.55□□□□□ -0.72
COL27A1-202ENST00000451716 HES7Q9BYE0 225 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 NOP16Q9Y3C1 178 aaKnown RBP10.55□□□□□ -0.72
COL27A1-202ENST00000451716 BOD1L1Q8NFC6 3051 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 KIAA1549Q9HCM3 1950 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ZFHX4Q86UP3 3567 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 SERPINA2P20848 420 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ITGA3P26006 1051 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF84P51523 738 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 RAB2AP61019 212 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 HGFACQ04756 655 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 EIF4E3Q8N5X7 224 aaKnown RBP10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ADAD2Q8NCV1 583 aaKnown RBP10.55□□□□□ -0.72
COL27A1-202ENST00000451716 NAXEQ8NCW5 288 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 RXFP4Q8TDU9 374 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 CASTOR1Q8WTX7 329 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 DOCK7Q96N67 2140 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 CACNA1HO95180 2353 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 FCGR2AP12318 317 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 AKR1C4P17516 323 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 HNF1AP20823 631 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 SRYQ05066 204 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 PPP1R1AQ13522 171 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 OR8G1Q15617 311 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms