RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 TCEAL5Q5H9L2 206 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 ATAD3CQ5T2N8 411 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 HES5Q5TA89 166 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 TMEM236Q5W0B7 351 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 METTL7BQ6UX53 244 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 LRRN1Q6UXK5 716 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 MTERF4Q7Z6M4 381 aaKnown RBP2.8□□□□□ -1.96
PMS1-216ENST00000447734 ZFP82Q8N141 532 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 CCNYL1Q8N7R7 359 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 OR10G6Q8NH81 332 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 STOML3Q8TAV4 291 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 PHOSPHO2Q8TCD6 241 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 TCEAL3Q969E4 200 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 SMIM12Q96EX1 92 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 TMEM101Q96IK0 257 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 BIRC8Q96P09 236 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 VGLL1Q99990 258 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 SELENOSQ9BQE4 189 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 FAAP24Q9BTP7 215 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 LINC00597Q9H2U6 94 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 RBFOX1Q9NWB1 397 aaKnown RBP2.8□□□□□ -1.96
PMS1-216ENST00000447734 DEC1Q9P2X7 70 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 SLC22A13Q9Y226 551 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 TP53TG1Q9Y2A0 90 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 SNX10Q9Y5X0 201 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 CHD4Q14839 1912 aa2.8□□□□□ -1.96
PMS1-216ENST00000447734 ADAMTSL3P82987 1691 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 WDR62O43379 1518 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 NUP153P49790 1475 aaKnown RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 C9orf84Q5VXU9 1444 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 ABCC11Q96J66 1382 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 IGKV1-8A0A0C4DH67 115 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 C21orf140B9A014 251 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 PSPHP1O15172 72 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 ZNF189O75820 626 aaPredicted RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 GABARAPO95166 117 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 SOX14O95416 240 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 TRBV12-3P01733 135 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 CD74P04233 296 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 HLA-DPB1P04440 258 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 IGKV5-2P06315 115 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 CDK1P06493 297 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 MRPL3P09001 348 aaKnown RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 TCN2P20062 427 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 HTR1EP28566 365 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 RBMXP38159 391 aaKnown RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 ERFP50548 548 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 HBG1P69891 147 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 HBG2P69892 147 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 PRDX1Q06830 199 aaKnown RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 CYP24A1Q07973 514 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 TSPAN31Q12999 210 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 NAB1Q13506 487 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 PMVKQ15126 192 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 C4orf26Q17RF5 130 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 CLEC12BQ2HXU8 276 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 HIGD2BQ4VC39 106 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 C6orf99Q4VX62 202 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 ORMDL2Q53FV1 153 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 ACSM3Q53FZ2 586 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 AKIRIN2Q53H80 203 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 SPIN4Q56A73 249 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 CST9Q5W186 159 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 KDM4DQ6B0I6 523 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 LAMTOR1Q6IAA8 161 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 CLEC19AQ6UXS0 136 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 NCCRP1Q6ZVX7 275 aaPredicted RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 TRAPPC5Q8IUR0 188 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 CPNE9Q8IYJ1 553 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 ZCCHC24Q8N2G6 241 aaKnown RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 RIBC1Q8N443 379 aaPredicted RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 C14orf178Q8N769 122 aaPredicted RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 NPBQ8NG41 125 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 ERMNQ8TAM6 284 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 C22orf15Q8WYQ4 148 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 RAB8BQ92930 207 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 HGDQ93099 445 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 ZNF689Q96CS4 500 aaPredicted RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 SMARCD1Q96GM5 515 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 MAGEB18Q96M61 343 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 QKIQ96PU8 341 aaKnown RBP eCLIP2.79□□□□□ -1.963e-8■■■□□ 17.9
PMS1-216ENST00000447734 DHRS9Q9BPW9 319 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 TMEM243Q9BU79 118 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 SFXN3Q9BWM7 321 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 KRTAP1-5Q9BYS1 174 aa2.79□□□□□ -1.96
PMS1-216ENST00000447734 SLC25A39Q9BZJ4 359 aaPredicted RBP2.79□□□□□ -1.96
PMS1-216ENST00000447734 ZNF608Q9ULD9 1512 aaPredicted RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 HCFC1P51610 2035 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 EVC2Q86UK5 1308 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 IGHV3-74A0A0B4J1X5 117 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 I3L4J1 428 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 ACOX3O15254 700 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 STX10O60499 249 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 NPIPB7O75200 414 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 SUPT3HO75486 399 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 REM1O75628 298 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 DHRS3O75911 302 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 DCTN3O75935 186 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms