RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MPPED2Q15777 294 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 GABRA6Q16445 453 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 RSPO4Q2I0M5 234 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-206ENST00000441580 C4orf46Q504U0 113 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-206ENST00000441580 LPCAT3Q6P1A2 487 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 FAM180AQ6UWF9 173 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 FBXW12Q6X9E4 464 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 TMEM200AQ86VY9 491 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 GVQW1Q8N7I0 195 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 ZNF611Q8N823 705 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 OR4S1Q8NGB4 309 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 OR13C8Q8NGS7 320 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 HPSE2Q8WWQ2 592 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 ZNF75AQ96N20 296 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 SCGB3A2Q96PL1 93 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 HIST1H2AAQ96QV6 131 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 SLC6A7Q99884 636 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 POFUT1Q9H488 388 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 SLA2Q9H6Q3 261 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 EDARQ9UNE0 448 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
CPSF4-206ENST00000441580 FABP7O15540 132 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 ANGPTL7O43827 346 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 SMPD2O60906 423 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 PLATP00750 562 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 CCL2P13500 99 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 SELEP16581 610 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 CXCL3P19876 107 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 TUBG1P23258 451 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 CHATP28329 748 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 PER3P56645 1201 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 PRSS12P56730 875 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 RBM11P57052 281 aaKnown RBP11.35□□□□□ -0.59
CPSF4-206ENST00000441580 CXADRP78310 365 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 P2RY6Q15077 328 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 NKPD1Q17RQ9 610 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 NHLRC3Q5JS37 347 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 NKAPLQ5M9Q1 402 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 C1orf185Q5T7R7 199 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 OR52W1Q6IF63 320 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 ZNF585AQ6P3V2 769 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 LINC00596Q86U02 117 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 RBMXL3Q8N7X1 1067 aaKnown RBP11.35□□□□□ -0.59
CPSF4-206ENST00000441580 OR5A2Q8NGI9 324 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 DLL4Q9NR61 685 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 TUBG2Q9NRH3 451 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 PLEKHJ1Q9NW61 149 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 AMDHD2Q9Y303 409 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 WDFY4Q6ZS81 3184 aa11.35□□□□□ -0.59
CPSF4-206ENST00000441580 RRP8O43159 456 aaKnown RBP11.34□□□□□ -0.59
CPSF4-206ENST00000441580 PDCD6O75340 191 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 LYZL6O75951 148 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 CSN2P05814 226 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 HOXD4P09016 255 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-206ENST00000441580 OR4E1P0C645 316 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 CBR1P16152 277 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 FPR2P25090 351 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 IDH3GP51553 393 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-206ENST00000441580 SNU13P55769 128 aaKnown RBP11.34□□□□□ -0.59
CPSF4-206ENST00000441580 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-206ENST00000441580 MICBQ29980 383 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 DMRTC1Q5HYR2 192 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 ELP2Q6IA86 826 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 VWA1Q6PCB0 445 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 TMED4Q7Z7H5 227 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 MED12LQ86YW9 2145 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 MKXQ8IYA7 352 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 ASCC1Q8N9N2 400 aaKnown RBP11.34□□□□□ -0.59
CPSF4-206ENST00000441580 Q8NFD4 153 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 OR2AK2Q8NG84 335 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 OR51F2Q8NH61 342 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 FBXW5Q969U6 566 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 GON7Q9BXV9 100 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 PLSCR4Q9NRQ2 329 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 ZNF701Q9NV72 531 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-206ENST00000441580 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
CPSF4-206ENST00000441580 DOCK7Q96N67 2140 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 IGKV1-12A0A0C4DH73 117 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 CEACAM18A8MTB9 384 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 GFRA3O60609 400 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 TNFSF13O75888 250 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 RGS11O94810 467 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 NGFP01138 241 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 IGKV1D-12P01611 117 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 PDGFAP04085 211 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 DNASE1P24855 282 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 OR3A3P47888 321 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 FGF12P61328 243 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 PPP1CBP62140 327 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 GNG3P63215 75 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 NHLH1Q02575 133 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 HLXQ14774 488 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-206ENST00000441580 NDUFA5Q16718 116 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 MPV17LQ2QL34 196 aa11.33□□□□□ -0.6
CPSF4-206ENST00000441580 CHRFAM7AQ494W8 412 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms