RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 RDH12Q96NR8 316 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 OR52B2Q96RD2 323 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 THUMPD2Q9BTF0 503 aaKnown RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 TMEM43Q9BTV4 400 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 CALN1Q9BXU9 219 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 MRPL20Q9BYC9 149 aaKnown RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 STMN4Q9H169 189 aaPredicted RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 ARV1Q9H2C2 271 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 PRORYQ9H606 182 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 RMND5AQ9H871 391 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 COQ10BQ9H8M1 238 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 SND1-IT1Q9HBX3 110 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 RAB18Q9NP72 206 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 FGF20Q9NP95 211 aaPredicted RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 TMEM38BQ9NVV0 291 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 RBM22Q9NW64 420 aaKnown RBP eCLIP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 TXNL4BQ9NX01 149 aaKnown RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 TAS2R9Q9NYW1 312 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 ACTR3BQ9P1U1 418 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 PSMC3IPQ9P2W1 217 aaPredicted RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 NOL7Q9UMY1 257 aaKnown RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 SLC17A4Q9Y2C5 497 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 C22orf24Q9Y442 160 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 SAR1BQ9Y6B6 198 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 NUP214P35658 2090 aaPredicted RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 DOCK8Q8NF50 2099 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 KAT6BQ8WYB5 2073 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 UBN2Q6ZU65 1347 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 PCDH11XQ9BZA7 1347 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 USP42Q9H9J4 1324 aaKnown RBP-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 TRIP11Q15643 1979 aa-0.15□□□□□ -2.43
SUMO1P3-201ENST00000439961 IGSF10Q6WRI0 2623 aa-0.16□□□□□ -2.43
SUMO1P3-201ENST00000439961 MED13Q9UHV7 2174 aa-0.16□□□□□ -2.43
SUMO1P3-201ENST00000439961 IGHV3-15A0A0B4J1V0 119 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 A0A1W2PPM0 123 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 SLC22A20A6NK97 555 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 CD300LBA8K4G0 201 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 A8MWP4 228 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 ANKRD65E5RJM6 399 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 H7C1H1 209 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 J3QQQ9 107 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 RAB29O14966 203 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 ZBTB5O15062 677 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 SMPD2O60906 423 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 CLDN11O75508 207 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR2A4O95047 310 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 DIRAS3O95661 229 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 LSM8O95777 96 aaKnown RBP-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 TRGV3P03979 118 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 IQCF3P0C7M6 154 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 SEC11BP0C7V7 166 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 KRT13P13646 458 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 GTF2F2P13984 249 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 CTLA4P16410 223 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 ZNF24P17028 368 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 TNNI1P19237 187 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 MX1P20591 662 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 USF1P22415 310 aaPredicted RBP-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 PAX6P26367 422 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 PSMA5P28066 241 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 CRABP1P29762 137 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 GGT2P36268 569 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 ATP6V1E1P36543 226 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 MYCNOSP40205 109 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 AKR1C3P42330 323 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 HINT1P49773 126 aaPredicted RBP-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 FABP6P51161 128 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 XKP51811 444 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 RAP1GDS1P52306 607 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 AP1S2P56377 157 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR2B8PP59922 312 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 RPL26P61254 145 aaKnown RBP-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 RPL23AP62750 156 aaKnown RBP-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 HTD2P86397 168 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 INCA1Q0VD86 236 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 TFDP2Q14188 446 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 TRAM2Q15035 370 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 WDR43Q15061 677 aaKnown RBP eCLIP-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 PPP1R7Q15435 360 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 GUSBP1Q15486 140 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 UAP1Q16222 522 aaPredicted RBP-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 USH1GQ495M9 461 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 CFAP157Q5JU67 520 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 STEAP4Q687X5 459 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 NIPAL1Q6NVV3 410 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 CYHR1Q6ZMK1 362 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 HORMAD1Q86X24 394 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 CBLN2Q8IUK8 224 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 SBSPONQ8IVN8 264 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 TBC1D21Q8IYX1 336 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 ZFP82Q8N141 532 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 ZNF283Q8N7M2 679 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 ZIC4Q8N9L1 334 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR10W1Q8NGF6 305 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR4X2Q8NGF9 303 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR5T3Q8NGG3 340 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR8B12Q8NGG6 310 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR1L4Q8NGR5 311 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR5B3Q8NH48 314 aa-0.16□□□□□ -2.44
SUMO1P3-201ENST00000439961 OR5K2Q8NHB8 316 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms