RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 LRRTM1Q86UE6 522 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 DEFB108BQ8NET1 73 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 ZNF671Q8TAW3 534 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 AQP3Q92482 292 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 SLAMF9Q96A28 289 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 NARFLQ9H6Q4 476 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 CHODLQ9H9P2 273 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 ELL3Q9HB65 397 aaPredicted RBP12.93□□□□□ -0.34
CNOT9-205ENST00000433439 MYOZ1Q9NP98 299 aaPredicted RBP12.93□□□□□ -0.34
CNOT9-205ENST00000433439 SNTG1Q9NSN8 517 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 POLQO75417 2590 aa12.93□□□□□ -0.34
CNOT9-205ENST00000433439 MEGF11A6BM72 1044 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 TRIM64BA6NI03 449 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 TMEM178BH3BS89 294 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 CYB5AP00167 134 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 ALDOBP05062 364 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 EGR1P18146 543 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 ADRA2CP18825 462 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 GALP22466 123 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 FGF9P31371 208 aaPredicted RBP12.92□□□□□ -0.34
CNOT9-205ENST00000433439 OR3A4PP47883 348 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 MRPS11P82912 194 aaKnown RBP12.92□□□□□ -0.34
CNOT9-205ENST00000433439 MXD1Q05195 221 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 SFRP4Q6FHJ7 346 aaPredicted RBP12.92□□□□□ -0.34
CNOT9-205ENST00000433439 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 PNLDC1Q8NA58 520 aaKnown RBP12.92□□□□□ -0.34
CNOT9-205ENST00000433439 Q8TCH9 128 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 TNFAIP8L1Q8WVP5 186 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 CPNE2Q96FN4 548 aaPredicted RBP12.92□□□□□ -0.34
CNOT9-205ENST00000433439 TIMD4Q96H15 378 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 KCTD7Q96MP8 289 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 FOXC2Q99958 501 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 PIMREGQ9BSJ6 248 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 NAA50Q9GZZ1 169 aaKnown RBP12.92□□□□□ -0.34
CNOT9-205ENST00000433439 TLNRD1Q9H1K6 362 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 ING4Q9UNL4 249 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 POLDIP2Q9Y2S7 368 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 TANC2Q9HCD6 1990 aa12.92□□□□□ -0.34
CNOT9-205ENST00000433439 IGHV3OR15-7A0A075B7D8 119 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 SHISA3A0PJX4 238 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 IFNL4K9M1U5 179 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 WNT9BO14905 357 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 CSF3P09919 207 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 CALCBP10092 127 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 GLRA1P23415 457 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 TGFBR1P36897 503 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 PDZK1IP1Q13113 114 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 GLT8D1Q68CQ7 371 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 CLVS1Q8IUQ0 354 aaPredicted RBP12.91□□□□□ -0.34
CNOT9-205ENST00000433439 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 OR51F2Q8NH61 342 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 C10orf105Q8TEF2 133 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 RAB1CQ92928 201 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 SEH1LQ96EE3 360 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 Q96MF0 132 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 PKIBQ9C010 78 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 BPESC1Q9GZL8 116 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 WIPI2Q9Y4P8 454 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 NPTNQ9Y639 398 aa12.91□□□□□ -0.34
CNOT9-205ENST00000433439 APCP25054 2843 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 PPIAL4EA0A075B759 164 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 IGHV4-30-2A0A087WSY4 118 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 PPIAL4DF5H284 164 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 TRAPPC2LH3BP13 241 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 PDCD5O14737 125 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 CDRT1O95170 752 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 PPIAL4FP0DN26 164 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 SNU13P55769 128 aaKnown RBP12.9□□□□□ -0.34
CNOT9-205ENST00000433439 TMEM33P57088 247 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 OR10A3P58181 314 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 DSCR9P59020 149 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 IL24Q13007 206 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 ZNF181Q2M3W8 571 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 SHEQ5VZ18 495 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 CRIP3Q6Q6R5 217 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 GCSAMQ8N6F7 178 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 OR10K1Q8NGX5 313 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 S100A13Q99584 98 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 WDR13Q9H1Z4 485 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 CNTD2Q9H8S5 307 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 PLGRKTQ9HBL7 147 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 MTCH1Q9NZJ7 389 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 DNAJB11Q9UBS4 358 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 MRPS28Q9Y2Q9 187 aaKnown RBP12.9□□□□□ -0.34
CNOT9-205ENST00000433439 PPIAL4AQ9Y536 164 aa12.9□□□□□ -0.34
CNOT9-205ENST00000433439 TRAV1-2A0A0B4J238 106 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 CCDC160A6NGH7 325 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 NXPH2O95156 264 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 CLEC2LP0C7M8 214 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 RAB3BP20337 219 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 BCL3P20749 454 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 MPZP25189 248 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 SDC2P34741 201 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 PTGFRP43088 359 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 NPBWR2P48146 333 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 ZP1P60852 638 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms