RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 VCX3BQ9H321 246 aa12.64□□□□□ -0.39
PTCD1-204ENST00000430982 CAB39Q9Y376 341 aaPredicted RBP12.64□□□□□ -0.39
PTCD1-204ENST00000430982 INSIG2Q9Y5U4 225 aa12.64□□□□□ -0.39
PTCD1-204ENST00000430982 IGHV2-70DA0A0C4DH43 119 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 EFCAB10A6NFE3 127 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 H0YJX3 145 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 J3QT63 122 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 TMPRSS2O15393 492 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 SYNGR1O43759 233 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 NPY4RP50391 375 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 GTF2A1P52655 376 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-204ENST00000430982 ST3GAL4Q11206 333 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 CNN3Q15417 329 aaKnown RBP12.63□□□□□ -0.39
PTCD1-204ENST00000430982 LAIR2Q6ISS4 152 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 C1orf229Q6ZS94 237 aaPredicted RBP12.63□□□□□ -0.39
PTCD1-204ENST00000430982 AHSA2Q719I0 299 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 OR51A4Q8NGJ6 313 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 FAM216AQ8WUB2 273 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 FBLIM1Q8WUP2 373 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 PP6455Q8WZ26 134 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 TMIGD2Q96BF3 282 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 C12orf43Q96C57 262 aaKnown RBP12.63□□□□□ -0.39
PTCD1-204ENST00000430982 ZNF488Q96MN9 340 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 PDCD1LG2Q9BQ51 273 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 MRI1Q9BV20 369 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 COMMD4Q9H0A8 199 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 SMURF1Q9HCE7 757 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 NLKQ9UBE8 527 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 OPN4Q9UHM6 478 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 CLEC2DQ9UHP7 191 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
PTCD1-204ENST00000430982 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 A0A1B0GW55 424 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 NKX6-3A6NJ46 265 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 TMEM212A6NML5 194 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DVL1O14640 695 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 ZFPL1O95159 310 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 TFF1P04155 84 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 OCM2P0CE71 109 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 OCMP0CE72 109 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4L2P0CJ85 424 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4L3P0CJ86 424 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4L4P0CJ87 422 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4L5P0CJ88 424 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4L6P0CJ89 424 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4L7P0CJ90 424 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 PIPP12273 146 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-204ENST00000430982 TGM4P49221 684 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 FUT6P51993 359 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 ACTG1P63261 375 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 STUMQ69YW2 141 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4L9Q6RFH8 374 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-204ENST00000430982 SLC36A1Q7Z2H8 476 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 C1QL2Q7Z5L3 287 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 ANGPTL5Q86XS5 388 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 BATF2Q8N1L9 274 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 STX19Q8N4C7 294 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 FAM216BQ8N7L0 139 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 POC1AQ8NBT0 407 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 OR5AK2Q8NH90 309 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 RAB40AQ8WXH6 277 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 BORCS8Q96FH0 119 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 NUDT16L1Q9BRJ7 211 aaKnown RBP12.62□□□□□ -0.39
PTCD1-204ENST00000430982 CNOT2Q9NZN8 540 aaKnown RBP12.62□□□□□ -0.39
PTCD1-204ENST00000430982 KAAG1Q9UBP8 84 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 DUX4Q9UBX2 424 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 POLDIP2Q9Y2S7 368 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 AUP1Q9Y679 476 aa12.62□□□□□ -0.39
PTCD1-204ENST00000430982 A0A0G2JK05 382 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 C22orf46C9J442 243 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 PLATP00750 562 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 ATF1P18846 271 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 GABRA2P47869 451 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 PAX2Q02962 417 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 IKZF1Q13422 519 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 RPL22L1Q6P5R6 122 aaKnown RBP12.61□□□□□ -0.39
PTCD1-204ENST00000430982 CALHM1Q8IU99 346 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 NANPQ8TBE9 248 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 TSEN15Q8WW01 171 aaKnown RBP12.61□□□□□ -0.39
PTCD1-204ENST00000430982 GATAD2BQ8WXI9 593 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 ZNF696Q9H7X3 374 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 PLCXD1Q9NUJ7 323 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 BABAM2Q9NXR7 383 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 PSORS1C1Q9UIG5 152 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
PTCD1-204ENST00000430982 IGKV1-27A0A075B6S5 117 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 IGKV1-9A0A0C4DH69 117 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 KIR2DS1A0A191URI9 304 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 OR2AT4A6NND4 320 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 NDUFB3O43676 98 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 ENSAO43768 121 aaKnown RBP12.6□□□□□ -0.39
PTCD1-204ENST00000430982 INMTO95050 263 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 ATP6V1G2O95670 118 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 RPSAP08865 295 aaKnown RBP12.6□□□□□ -0.39
PTCD1-204ENST00000430982 PGA5P0DJD9 388 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 SELLP14151 372 aa12.6□□□□□ -0.39
PTCD1-204ENST00000430982 AMY2BP19961 511 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms