RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 NPBWR2P48146 333 aa14.84□□□□□ -0.03
RIF1-204ENST00000430328 TCL1AP56279 114 aa14.84□□□□□ -0.03
RIF1-204ENST00000430328 DUSP2Q05923 314 aa14.84□□□□□ -0.03
RIF1-204ENST00000430328 SPRED3Q2MJR0 410 aa14.84□□□□□ -0.03
RIF1-204ENST00000430328 TMEM64Q6YI46 380 aa14.84□□□□□ -0.03
RIF1-204ENST00000430328 SIRT7Q9NRC8 400 aa14.84□□□□□ -0.03
RIF1-204ENST00000430328 C11orf94C9JXX5 98 aa14.83□□□□□ -0.03
RIF1-204ENST00000430328 HIST1H1EP10412 219 aaKnown RBP14.83□□□□□ -0.03
RIF1-204ENST00000430328 NKAIN1Q4KMZ8 207 aa14.83□□□□□ -0.03
RIF1-204ENST00000430328 RHBDD2Q6NTF9 364 aa14.83□□□□□ -0.03
RIF1-204ENST00000430328 ZNF683Q8IZ20 524 aa14.83□□□□□ -0.03
RIF1-204ENST00000430328 PGPEP1Q9NXJ5 209 aa14.83□□□□□ -0.03
RIF1-204ENST00000430328 TECRQ9NZ01 308 aaKnown RBP14.83□□□□□ -0.03
RIF1-204ENST00000430328 BCL9O00512 1426 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 KIR3DL2P43630 455 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 CDX1P47902 265 aaPredicted RBP14.83□□□□□ -0.04
RIF1-204ENST00000430328 PARM1Q6UWI2 310 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 DPH3Q96FX2 82 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 ZNF749O43361 778 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 PDE6DO43924 150 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 CXCL12P48061 93 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 YPEL5P62699 121 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 YBX1P67809 324 aaKnown RBP14.83□□□□□ -0.04
RIF1-204ENST00000430328 FUT7Q11130 342 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 SHBQ15464 509 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 RBM45Q8IUH3 476 aaKnown RBP14.83□□□□□ -0.04
RIF1-204ENST00000430328 SLC46A2Q9BY10 475 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 NAV1Q8NEY1 1877 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 CDK5RAP2Q96SN8 1893 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 TDRD6O60522 2096 aaKnown RBP14.83□□□□□ -0.04
RIF1-204ENST00000430328 DOCK8Q8NF50 2099 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 SNURFLB1AK76 121 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 PRSS2P07478 247 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 MRM1Q6IN84 353 aaKnown RBP14.83□□□□□ -0.04
RIF1-204ENST00000430328 WFDC8Q8IUA0 241 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 ARIH2OSQ8N7S6 290 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 RPEQ96AT9 228 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 TAAR3PQ9P1P4 343 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 AMMECR1Q9Y4X0 333 aaPredicted RBP14.83□□□□□ -0.04
RIF1-204ENST00000430328 AUP1Q9Y679 476 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 CEACAM6P40199 344 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 LGALS7P47929 136 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 Q8IYB0 196 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 S1PR5Q9H228 398 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 AUNIPQ9H7T9 357 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 TREX1Q9NSU2 369 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 PROCRQ9UNN8 238 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 FANCMQ8IYD8 2048 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 NDUFB3O43676 98 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 CEBPBP17676 345 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 ASCL1P50553 236 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 CLDN15P56746 228 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 FABP5Q01469 135 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 PTX4Q96A99 478 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 KLK11Q9UBX7 282 aa14.83□□□□□ -0.04
RIF1-204ENST00000430328 PI4KAP42356 2102 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 NDUFS8O00217 210 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 HOXC13P31276 330 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 ZNF121P58317 390 aaPredicted RBP14.82□□□□□ -0.04
RIF1-204ENST00000430328 SLC45A1Q9Y2W3 748 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 TRAV1-2A0A0B4J238 106 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 ZNF346Q9UL40 294 aaKnown RBP14.82□□□□□ -0.04
RIF1-204ENST00000430328 A0A096LPE4 126 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 A0A1W2PPZ6 126 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 GEMIN2O14893 280 aaKnown RBP14.82□□□□□ -0.04
RIF1-204ENST00000430328 SPATA45Q537H7 98 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 SPANXN1Q5VSR9 72 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 FIGNL2A6NMB9 653 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 TEX101Q9BY14 249 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 DIP2CQ9Y2E4 1556 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 PPP6CO00743 305 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 IL13RA2Q14627 380 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 LINC00303Q3SY05 128 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 ABHD3Q8WU67 409 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 SMIM4Q8WVI0 70 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 CDX2Q99626 313 aaPredicted RBP14.82□□□□□ -0.04
RIF1-204ENST00000430328 GDE1Q9NZC3 331 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 FOXJ3Q9UPW0 622 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 BCL9LQ86UU0 1499 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 AVPR2P30518 371 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 TMEM70Q9BUB7 260 aa14.82□□□□□ -0.04
RIF1-204ENST00000430328 RBFOX2O43251 390 aaKnown RBP eCLIP14.81□□□□□ -0.048e-7■■□□□ 13.4
RIF1-204ENST00000430328 TWIST1Q15672 202 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 AWAT1Q58HT5 328 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 PARS2Q7L3T8 475 aaKnown RBP14.81□□□□□ -0.04
RIF1-204ENST00000430328 MBLAC1A4D2B0 266 aaPredicted RBP14.81□□□□□ -0.04
RIF1-204ENST00000430328 ALOX12BO75342 701 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 PNLIPRP2P54317 469 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 HERPUD1Q15011 391 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 SP6Q3SY56 376 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 TM4SF18Q96CE8 201 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 FLYWCH2Q96CP2 140 aaKnown RBP14.81□□□□□ -0.04
RIF1-204ENST00000430328 CDC42EP3Q9UKI2 254 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 EMCNQ9ULC0 261 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 HPXP02790 462 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 SNRNP40Q96DI7 357 aaKnown RBP14.81□□□□□ -0.04
RIF1-204ENST00000430328 LANCL1O43813 399 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 MBPP02686 304 aaPredicted RBP14.81□□□□□ -0.04
RIF1-204ENST00000430328 CTSCP53634 463 aa14.81□□□□□ -0.04
RIF1-204ENST00000430328 TMEM99Q8N816 258 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms