RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TPPPO94811 219 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 IGHG2P01859 326 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 TK1P04183 234 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 TFAP2AP05549 437 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 ABHD2P08910 425 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF823P16415 610 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 PPIBP23284 216 aaKnown RBP4.87□□□□□ -1.63
SDCBP-203ENST00000424270 CRABP1P29762 137 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 IFNA8P32881 189 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 GPM6AP51674 278 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 HIST1H3AP68431 136 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 PRDX4Q13162 271 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 DUSP7Q16829 419 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 CYP51A1Q16850 503 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 RSPO1Q2MKA7 263 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-203ENST00000424270 HIST2H3PS2Q5TEC6 136 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 SLC18B1Q6NT16 456 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 DRAM2Q6UX65 266 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 HIST2H3AQ71DI3 136 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 SLC16A9Q7RTY1 509 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 FAM71E2Q8N5Q1 922 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 CD177Q8N6Q3 437 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF781Q8N8C0 355 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 CSNK2A3Q8NEV1 391 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 OR4P4Q8NGL7 312 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 OR13C2Q8NGS9 318 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 OR56B4Q8NH76 319 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 TSEN15Q8WW01 171 aaKnown RBP4.87□□□□□ -1.63
SDCBP-203ENST00000424270 PIGCQ92535 297 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 TOMM40LQ969M1 308 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 UTP4Q969X6 686 aaKnown RBP4.87□□□□□ -1.63
SDCBP-203ENST00000424270 RPEQ96AT9 228 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 REEP6Q96HR9 211 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 PRSS27Q9BQR3 290 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 PARD6BQ9BYG5 372 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 TLNRD1Q9H1K6 362 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 ABCB9Q9NP78 766 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 SCRT2Q9NQ03 307 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 CENPMQ9NSP4 180 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 RIMS3Q9UJD0 308 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF222Q9UK12 451 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 SH3GLB1Q9Y371 365 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 RHBDD3Q9Y3P4 386 aa4.87□□□□□ -1.63
SDCBP-203ENST00000424270 ELOA3CA0A087WX78 387 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 LINC01548A6NM66 108 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 M0QX08 132 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 FGF16O43320 207 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 RIPK2O43353 540 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 NXPH2O95156 264 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 CD14P08571 375 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 OR5H8P0DN80 308 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 CFL1P23528 166 aaKnown RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 HSD11B1P28845 292 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 RPL14P50914 215 aaKnown RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 POLR2JP52435 117 aaKnown RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 PRRX1P54821 245 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 DLX6P56179 175 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 CD81P60033 236 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 ZP1P60852 638 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 KCNMB1Q16558 191 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 KIAA2026Q5HYC2 2103 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 TPTE2P1Q5T6R2 138 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 ASPHD1Q5U4P2 390 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 OR52W1Q6IF63 320 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 FAM53AQ6NSI3 398 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 TRMT10CQ7L0Y3 403 aaKnown RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 TSPYL5Q86VY4 417 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 ZDHHC23Q8IYP9 409 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 BATF2Q8N1L9 274 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 OR4D11Q8NGI4 311 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 MZB1Q8WU39 189 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 PHLDA1Q8WV24 401 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 LIPHQ8WWY8 451 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 APOPT1Q96IL0 206 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 UBE2E2Q96LR5 201 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 TSSK2Q96PF2 358 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 RASL11BQ9BPW5 248 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 TINAGL1Q9GZM7 467 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 ALX4Q9H161 411 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 NMNAT1Q9HAN9 279 aaPredicted RBP4.86□□□□□ -1.63
SDCBP-203ENST00000424270 BRD7Q9NPI1 651 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 FAM53CQ9NYF3 392 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 RASL12Q9NYN1 266 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 CORO2BQ9UQ03 480 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 MPC1Q9Y5U8 109 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 SORL1Q92673 2214 aa4.86□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF732B4DXR9 585 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 MTRF1O75570 445 aaKnown RBP4.85□□□□□ -1.63
SDCBP-203ENST00000424270 NDUFB8O95169 186 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 RENP00797 406 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 IGKV1D-33P01593 117 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 IGKV1-33P01594 117 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 IFNA4P05014 189 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 TSPAN19P0C672 248 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 IDO1P14902 403 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 KIR3DL2P43630 455 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 GPR4P46093 362 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 FAM3AP98173 230 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 BDH1Q02338 343 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 PIN1Q13526 163 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms