RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NPFFO15130 113 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 KCNAB3O43448 404 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 MTRF1O75570 445 aaKnown RBP12.35□□□□□ -0.43
UBXN4-203ENST00000416538 NRASP01111 189 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 PGA5P0DJD9 388 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 CCL1P22362 96 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 SAA4P35542 130 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 EGR3Q06889 387 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 THAP5Q7Z6K1 395 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 CALHM1Q8IU99 346 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 ZDHHC13Q8IUH4 622 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 GID4Q8IVV7 300 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 AJUBAQ96IF1 538 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 DMRTB1Q96MA1 342 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 HIST1H2AAQ96QV6 131 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 IGKV1-27A0A075B6S5 117 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 RFPL4AA6NLU0 287 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 RFPL4AL1F8VTS6 287 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 J3QT63 122 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 RPP14O95059 124 aaKnown RBP12.34□□□□□ -0.43
UBXN4-203ENST00000416538 MPZP25189 248 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 PAX6P26367 422 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 HAAOP46952 286 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 ODF4Q2M2E3 257 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 CLVS2Q5SYC1 327 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 OLFML2AQ68BL7 652 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 CATSPERDQ86XM0 798 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 OR4F5Q8NH21 305 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 DYRK2Q92630 601 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 RORBQ92753 470 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 UBE2FQ969M7 185 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 EME1Q96AY2 570 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 MED30Q96HR3 178 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 MNTQ99583 582 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 NRIP2Q9BQI9 281 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 OSBPL10Q9BXB5 764 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 RIBC2Q9H4K1 309 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 HES4Q9HCC6 221 aa12.34□□□□□ -0.43
UBXN4-203ENST00000416538 A0A1W2PQ09 198 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 CLPSL1A2RUU4 121 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 MEGF11A6BM72 1044 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 F8VVB4 439 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 F8VWA3 439 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 M0R1W7 72 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 KNG1P01042 644 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 FCGR1AP12314 374 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 HTR1FP30939 366 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 KIR3DL2P43630 455 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 ISL1P61371 349 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 ZNF85Q03923 595 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 Q6ZSV7 163 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 ASRGL1Q7L266 308 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 CMTM4Q8IZR5 234 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 FAM185AQ8N0U4 392 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 PRSS35Q8N3Z0 413 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 C11orf42Q8N5U0 333 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 LINC01006Q8NI28 216 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 TRMT10AQ8TBZ6 339 aaKnown RBP12.33□□□□□ -0.44
UBXN4-203ENST00000416538 NPRL2Q8WTW4 380 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 PYDC1Q8WXC3 89 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 ITFG2Q969R8 447 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 CENPNQ96H22 339 aaPredicted RBP12.33□□□□□ -0.44
UBXN4-203ENST00000416538 CITED1Q99966 193 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 WARS2Q9UGM6 360 aaKnown RBP12.33□□□□□ -0.44
UBXN4-203ENST00000416538 SNX5Q9Y5X3 404 aa12.33□□□□□ -0.44
UBXN4-203ENST00000416538 NOTCH1P46531 2555 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 KIAA2026Q5HYC2 2103 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 E9PQ18 207 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 H3BNX3 289 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 DLGAP1O14490 977 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 NOS1APO75052 506 aaPredicted RBP12.32□□□□□ -0.44
UBXN4-203ENST00000416538 FBP1P09467 338 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 PROK1P58294 105 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 ERVFRD-1P60508 538 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 ERVK11-1P61568 191 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 GUCA2AQ02747 115 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 ZNF273Q14593 569 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 TREML4Q6UXN2 200 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 ANGPTL5Q86XS5 388 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 YIPF7Q8N8F6 280 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 OR10H4Q8NGA5 316 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 ZNF671Q8TAW3 534 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 TBC1D15Q8TC07 691 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 METTL8Q9H825 291 aaKnown RBP12.32□□□□□ -0.44
UBXN4-203ENST00000416538 BEX1Q9HBH7 125 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 H2AFY2Q9P0M6 372 aaPredicted RBP12.32□□□□□ -0.44
UBXN4-203ENST00000416538 VPREB3Q9UKI3 123 aa12.32□□□□□ -0.44
UBXN4-203ENST00000416538 TRBV23-1A0A0A0MS06 115 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 MEIOCA2RUB1 952 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 ANKRD61A6NGH8 418 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 DHRS7CA6NNS2 312 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 KRT8P05787 483 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 CRYBA1P05813 215 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 CCL3L1P16619 93 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 RASSF2P50749 326 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 UBE2E1P51965 193 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 RPL15P61313 204 aaKnown RBP12.31□□□□□ -0.44
UBXN4-203ENST00000416538 UBE2V2Q15819 145 aa12.31□□□□□ -0.44
UBXN4-203ENST00000416538 TP53I3Q53FA7 332 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms