RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ETV3LQ6ZN32 361 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 HSD17B13Q7Z5P4 300 aaPredicted RBP7.52□□□□□ -1.21
SYNE1-211ENST00000413186 ADGRE4PQ86SQ3 457 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 TRAPPC6BQ86SZ2 158 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 LSRQ86X29 649 aaPredicted RBP7.52□□□□□ -1.21
SYNE1-211ENST00000413186 C1orf174Q8IYL3 243 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 HSD17B11Q8NBQ5 300 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 PELI1Q96FA3 418 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 SFRP2Q96HF1 295 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 PITPNC1Q9UKF7 332 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 PIEZO1Q92508 2521 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 A0A1B0GUH1 482 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 ZNF815PA8K554 130 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 ZIC3O60481 467 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 RFPL3SP0C7P2 107 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 GABRR1P24046 479 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 HES1Q14469 280 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 FAM27BQ5VT28 67 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 CD276Q5ZPR3 534 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 NUDT10Q8NFP7 164 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 OR4M1Q8NGD0 313 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 OR2T35Q8NGX2 323 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 FAM3DQ96BQ1 224 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 NUDT11Q96G61 164 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 SFXN3Q9BWM7 321 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 SEPSECSQ9HD40 501 aaKnown RBP7.52□□□□□ -1.21
SYNE1-211ENST00000413186 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 DLL3Q9NYJ7 618 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 GHRLQ9UBU3 117 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 ARL2-SNX15V9GYD0 113 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 BDP1A6H8Y1 2624 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 NKX6-3A6NJ46 265 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 RAB29O14966 203 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 NEURL1O76050 574 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 IGHA1P01876 353 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 TAS2R46P59540 309 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 H3F3AP84243 136 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 SAPCD1Q5SSQ6 148 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 FNDC7Q5VTL7 733 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 ARHGEF39Q8N4T4 335 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 CCDC71LQ8N9Z2 235 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 SLC26A10Q8NG04 563 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 SPSB1Q96BD6 273 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 RHNO1Q9BSD3 238 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 SRRQ9GZT4 340 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 ISG20L2Q9H9L3 353 aaKnown RBP7.52□□□□□ -1.21
SYNE1-211ENST00000413186 RPH3ALQ9UNE2 315 aa7.52□□□□□ -1.21
SYNE1-211ENST00000413186 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 F5H5P2 479 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 NCR1O76036 304 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 GCGP01275 180 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TCRBP04435 133 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 OR5H8P0DN80 308 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 SRP9P49458 86 aaKnown RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CRYBA2P53672 197 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 HNF4GQ14541 408 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 PPA1Q15181 289 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ANGPTL5Q86XS5 388 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 OR5AS1Q8N127 324 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 FBXL14Q8N1E6 418 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 OR8U1Q8NH10 309 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ZPLD1Q8TCW7 415 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 GPR173Q9NS66 373 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CD3EP07766 207 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TAF9Q16594 264 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 DTX1Q86Y01 620 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CDC20BQ86Y33 519 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 SMAP2Q8WU79 429 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 UBL7Q96S82 380 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ZNF426Q9BUY5 554 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 BCO1Q9HAY6 547 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 HES4Q9HCC6 221 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TAS2R4Q9NYW5 299 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 MYEF2Q9P2K5 600 aaKnown RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ERRFI1Q9UJM3 462 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 LRRK1Q38SD2 2015 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 MS4A18H0YCH9 400 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ARPC1BO15143 372 aaKnown RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 KNG1P01042 644 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TFP02787 698 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TNFRSF1AP19438 455 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 GABRA2P47869 451 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 CDC34P49427 236 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ZNF133P52736 654 aaPredicted RBP7.51□□□□□ -1.21
SYNE1-211ENST00000413186 TLE4Q04727 773 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 IKZF1Q13422 519 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ADIRFQ15847 76 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ETFDHQ16134 617 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 MS4A18Q3C1V0 323 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 GLIPR1L1Q6UWM5 242 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 LYPD4Q6UWN0 246 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 LURAP1LQ8IV03 231 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 C20orf196Q8IYI0 205 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 ASB13Q8WXK3 278 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 SELENOIQ9C0D9 397 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 SLC17A5Q9NRA2 495 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 OR14J1Q9UGF5 321 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 FOXJ3Q9UPW0 622 aa7.51□□□□□ -1.21
SYNE1-211ENST00000413186 PUS1Q9Y606 427 aaKnown RBP eCLIP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms