RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PGCP20142 388 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 GDF1P27539 372 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 MDH2P40926 338 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PTGDSP41222 190 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 RBM34P42696 430 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ERFP50548 548 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC25A1P53007 311 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 COPZ1P61923 177 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF117Q03924 483 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 HSF2Q03933 536 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ST3GAL3Q11203 375 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 SRSF6Q13247 344 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 DGCR6Q14129 220 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 TRAM2Q15035 370 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR1Q1Q15612 314 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 SNCBQ16143 134 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 GLYR1Q49A26 553 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 OGFRL1Q5TC84 451 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF57Q68EA5 555 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ULK3Q6PHR2 472 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGFL3Q6UXB1 125 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PAMR1Q6UXH9 720 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 BAIAP2L2Q6UXY1 529 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 MARCH3Q86UD3 253 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 COMTD1Q86VU5 262 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PLCZ1Q86YW0 608 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 RBM45Q8IUH3 476 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 CYP4Z2PQ8N1L4 340 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 FADS6Q8N9I5 356 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR5W2Q8NH69 310 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR5K1Q8NHB7 308 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ADAMTS16Q8TE57 1224 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 DNAJC9Q8WXX5 260 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 TMEM234Q8WY98 164 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ST8SIA1Q92185 356 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC38A4Q969I6 547 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 RDH12Q96NR8 316 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 MCHR1Q99705 422 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 WFDC6Q9BQY6 131 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 C9orf16Q9BUW7 83 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF426Q9BUY5 554 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 OSBPL11Q9BXB4 747 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 GABARAPL1Q9H0R8 117 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 VCX3BQ9H321 246 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PTGES2Q9H7Z7 377 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 METTL7AQ9H8H3 244 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 REEP1Q9H902 201 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 LIN28AQ9H9Z2 209 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 TMEM27Q9HBJ8 222 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 PROK2Q9HC23 129 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ACER3Q9NUN7 267 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 VSIG4Q9Y279 399 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 SAMHD1Q9Y3Z3 626 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 WIF1Q9Y5W5 379 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 V9GYQ6 96 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 FREM1Q5H8C1 2179 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 INTS1Q8N201 2190 aaKnown RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 NCOA6Q14686 2063 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 ACACBO00763 2458 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 MGAQ8IWI9 3026 aa3.67□□□□□ -1.82
HMGB3P19-201ENST00000403971 RP1L1Q8IWN7 2480 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TLN1Q9Y490 2541 aaKnown RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 LAMA5O15230 3695 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A087WUJ7 227 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A087WUU8 490 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A1B0GVY2 172 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A1B0GWA3 101 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZSCAN5BA6NJL1 495 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 G3V2T6 193 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TNFRSF11BO00300 401 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC17A2O00624 439 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 BCAS1O75363 584 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TRIM3O75382 744 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 E2F6O75461 281 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 B3GALNT1O75752 331 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 CBR3O75828 277 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 DIRAS1O95057 198 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 DUSP14O95147 198 aaKnown RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 LYPD3O95274 346 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 GKN3PP0CG01 181 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 CCL3P10147 92 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 PRG2P13727 222 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 ANXA8P13928 327 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 CNR1P21554 472 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 FKBP2P26885 142 aaKnown RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 HTR2AP28223 471 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 RRM2P31350 389 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 IFNGR2P38484 337 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 VHLP40337 213 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 EIF1P41567 113 aaKnown RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 PTGFRP43088 359 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TAS2R41P59536 307 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SPIBQ01892 262 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 OC90Q02509 493 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 PUDPQ08623 228 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 GANABQ14697 944 aaKnown RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TRIP10Q15642 601 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 GSG1Q2KHT4 349 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 DEFB109BQ30KR1 87 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 RFX4Q33E94 735 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms