RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 C8orf59Q8N0T1 100 aaPredicted RBP11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF676Q8N7Q3 588 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TFAP2CQ92754 450 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TMIGD2Q96BF3 282 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 PDCD1LG2Q9BQ51 273 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 VCXQ9H320 206 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CLEC2DQ9UHP7 191 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SLC7A11Q9UPY5 501 aa11.68□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IGKV1-9A0A0C4DH69 117 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 J3QT63 122 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 XPNPEP2O43895 674 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 INMTO95050 263 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SERPINA3P01011 423 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 PSG2P11465 335 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TGM4P49221 684 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ARMCX4Q5H9R4 360 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ATPAF1Q5TC12 328 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CD276Q5ZPR3 534 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF788Q6ZQV5 615 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CCDC54Q8NEL0 328 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 OR13C3Q8NGS6 347 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 PP6455Q8WZ26 134 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GGHQ92820 318 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GAFA1Q96PS6 74 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 MYCBPQ99417 103 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 HHLA2Q9UM44 414 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 HSPE1-MOB4S4R3N1 261 aa11.67□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TCF21O43680 179 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ENSAO43768 121 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GATBO75879 557 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 PLATP00750 562 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 PGA5P0DJD9 388 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IGHV4-38-2P0DP08 117 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF20P17024 532 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 MPZP25189 248 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GABRA2P47869 451 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GBX2P52951 348 aaPredicted RBP11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 AQP4P55087 323 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FGF12P61328 243 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ST3GAL4Q11206 333 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 DGUOKQ16854 277 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ACP7Q6ZNF0 438 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 EGFL6Q8IUX8 553 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 POC1AQ8NBT0 407 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNRF1Q8ND25 227 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 OR5AK2Q8NH90 309 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 C10orf35Q96D05 121 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SLC6A7Q99884 636 aa11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 DIMT1Q9UNQ2 313 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TRBV2A0A0J9YWF9 115 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 RNF212BA8MTL3 300 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 F8VVB4 439 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 F8VWA3 439 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NDUFB3O43676 98 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SFTPBP07988 381 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CEBPDP49716 269 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FUT6P51993 359 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 IL13RA1P78552 427 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 KRTAP24-1Q3LI83 254 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 RNF144BQ7Z419 303 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 BCL6BQ8N143 479 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 BPIFB6Q8NFQ5 453 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 FBLIM1Q8WUP2 373 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 GATAD2BQ8WXI9 593 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 UPRTQ96BW1 309 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 BORCS8Q96FH0 119 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 TMEM80Q96HE8 168 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NRIP2Q9BQI9 281 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 DNTTIP1Q9H147 329 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF69Q9UC07 566 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 RPUSD1Q9UJJ7 312 aaKnown RBP11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 ZNF222Q9UK12 451 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 NUP50Q9UKX7 468 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 CAB39Q9Y376 341 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 MAB21L2Q9Y586 359 aa11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 SIRT4Q9Y6E7 314 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-202ENST00000399079 DNHD1Q96M86 4753 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TRAV40A0A0B4J280 105 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 IRGMA1A4Y4 181 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 NKX6-3A6NJ46 265 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RFPL4AA6NLU0 287 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TMEM212A6NML5 194 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RFPL4AL1F8VTS6 287 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SIGLEC5O15389 551 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 NOS1APO75052 506 aaPredicted RBP11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 NXPH2O95156 264 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 VENTXO95231 258 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 LALBAP00709 142 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MYL12AP19105 171 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ARF6P62330 175 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 IL24Q13007 206 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MRPL28Q13084 256 aaKnown RBP11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SCGB2A2Q13296 93 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CNN3Q15417 329 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms