RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ATP1B3P54709 279 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 TPBGQ13641 420 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 KCTD21Q4G0X4 260 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 CLEC9AQ6UXN8 241 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 FAM90A1Q86YD7 464 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 OR10Z1Q8NGY1 313 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 MSI2Q96DH6 328 aaKnown RBP21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 ISYNA1Q9NPH2 558 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 LRCH1Q9Y2L9 728 aa21.23■□□□□ 0.99
TMEM55B-202ENST00000398020 ZNF879B4DU55 563 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 HEXAP06865 529 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 HCKP08631 526 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 RAB3AP20336 220 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 PCMT1P22061 227 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 LYPD2Q6UXB3 125 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 ZNF671Q8TAW3 534 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 SNTG1Q9NSN8 517 aa21.22■□□□□ 0.99
TMEM55B-202ENST00000398020 GYPAP02724 150 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 ZNF16P17020 682 aaPredicted RBP21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 MPZP25189 248 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 POU3F4P49335 361 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 SEC61A1P61619 476 aaKnown RBP21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 LHFPL2Q6ZUX7 228 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 SLC25A26Q70HW3 274 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 OR5T2Q8NGG2 359 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 OR5D18Q8NGL1 313 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 RAB39BQ96DA2 213 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 DERL3Q96Q80 235 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 NKX3-1Q99801 234 aaPredicted RBP21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 PATZ1Q9HBE1 687 aaKnown RBP21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 TRAV38-1A0A0B4J264 116 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 CPEP16870 476 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 GLRA1P23415 457 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 RPS25P62851 125 aaKnown RBP21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 GPR50Q13585 617 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 MICBQ29980 383 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 ARMCX4Q5H9R4 360 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 TEX36Q5VZQ5 186 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 ZNF529Q6P280 563 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 PHC2Q8IXK0 858 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 MS4A15Q8N5U1 240 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 SLAMF9Q96A28 289 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 DNAJB11Q9UBS4 358 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 POLDIP2Q9Y2S7 368 aa21.21■□□□□ 0.99
TMEM55B-202ENST00000398020 TRAV8-7A0A075B6U6 113 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 TRBV5-7A0A0A0MS05 114 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 FSTL3O95633 263 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 TFF1P04155 84 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 RPS2P15880 293 aaKnown RBP21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 GZMKP49863 264 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 IL24Q13007 206 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 ACSM3Q53FZ2 586 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 CYB5R2Q6BCY4 276 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 CRIP3Q6Q6R5 217 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 POC1AQ8NBT0 407 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 PKIBQ9C010 78 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 NOX4Q9NPH5 578 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 SVEP1Q4LDE5 3571 aa21.2■□□□□ 0.98
TMEM55B-202ENST00000398020 PIN1P1O15428 100 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 SPRY1O43609 319 aaPredicted RBP21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 TNFAIP8O95379 198 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 PGA5P0DJD9 388 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 PPP3R1P63098 170 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 FAM27D1Q5T7N8 215 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 UBE2UQ5VVX9 321 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 DCDC5Q6ZRR9 648 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 OR52N4Q8NGI2 321 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 MTCH1Q9NZJ7 389 aa21.19■□□□□ 0.98
TMEM55B-202ENST00000398020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.18■□□□□ 0.987e-8■■■□□ 17.2
TMEM55B-202ENST00000398020 MAGEA13PA6NCF6 341 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 ALX3O95076 343 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 TGFAP01135 160 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 PSMB9P28065 219 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 TGFBR2P37173 567 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 KISS1Q15726 138 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 SSX1Q16384 188 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 SATL1Q86VE3 508 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 TMIGD2Q96BF3 282 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 NEK6Q9HC98 313 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 CKLFQ9UBR5 152 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 F8VVB4 439 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 F8VWA3 439 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 MAGEB3O15480 346 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 ANGPTL7O43827 346 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 WNT2P09544 360 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 MUC1P15941 1255 aaPredicted RBP21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 IGFBP3P17936 291 aaPredicted RBP21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 KCNJ8Q15842 424 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 CEACAM19Q7Z692 300 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 LURAP1LQ8IV03 231 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 LINC01356Q8N9X3 169 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 C1orf159Q96HA4 380 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 NRIP2Q9BQI9 281 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 MIOXQ9UGB7 285 aa21.18■□□□□ 0.98
TMEM55B-202ENST00000398020 F5H0A9 414 aaPredicted RBP21.17■□□□□ 0.98
TMEM55B-202ENST00000398020 ADAM20O43506 726 aa21.17■□□□□ 0.98
TMEM55B-202ENST00000398020 CD5LO43866 347 aa21.17■□□□□ 0.98
TMEM55B-202ENST00000398020 NXPH2O95156 264 aa21.17■□□□□ 0.98
TMEM55B-202ENST00000398020 MAPK3P27361 379 aaPredicted RBP21.17■□□□□ 0.98
TMEM55B-202ENST00000398020 LCN2P80188 198 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms