RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 S1PR5Q9H228 398 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 AUNIPQ9H7T9 357 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 TRDV1A0A1B0GX56 115 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 A6NDN8 102 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 AKR7A2O43488 359 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 WNT1P04628 370 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 COX6CP09669 75 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 SNRPEP62304 92 aaKnown RBP11.09□□□□□ -0.63
SMU1-201ENST00000397149 LRRC26Q2I0M4 334 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 AGBL4Q5VU57 503 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
SMU1-201ENST00000397149 SLC48A1Q6P1K1 146 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 OR13F1Q8NGS4 319 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 ASB16Q96NS5 453 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 TMEM9BQ9NQ34 198 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 RAXQ9Y2V3 346 aa11.09□□□□□ -0.63
SMU1-201ENST00000397149 TRAV8-7A0A075B6U6 113 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 P01737 135 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 PAQR6Q6TCH4 344 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 DPPA3Q6W0C5 159 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 ADAT3Q96EY9 351 aaPredicted RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 LMTK2Q8IWU2 1503 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 RPL18Q07020 188 aaKnown RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 ELAVL1Q15717 326 aaKnown RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 CCSMST1Q4G0I0 132 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 OR4A47Q6IF82 309 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 LYSMD2Q8IV50 215 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 MS4A8Q9BY19 250 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 C6orf106Q9H6K1 298 aaPredicted RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 OR6C3Q9NZP0 311 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 AMMECR1Q9Y4X0 333 aaPredicted RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 CDX4O14627 284 aaPredicted RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 MRGPRDQ8TDS7 321 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 OXGR1Q96P68 337 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 GPA33Q99795 319 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 CHODLQ9H9P2 273 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 MFSD2BA6NFX1 497 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 MFAP4P55083 255 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 AQP10Q96PS8 301 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 LIMS3P0CW19 117 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 LIMS4P0CW20 117 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 AVPR2P30518 371 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 DCTDP32321 178 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 HOXD13P35453 343 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 OR52N1Q8NH53 320 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 RAB1BQ9H0U4 201 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 ASCL3Q9NQ33 180 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 TRGV5A0A0B4J1U4 118 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 TCRBV3S1A0A5B6 114 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 ARNTLO00327 626 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 EPXP11678 715 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 HOXD9P28356 352 aaPredicted RBP11.08□□□□□ -0.64
SMU1-201ENST00000397149 LIPAP38571 399 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 KCNMB1Q16558 191 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 IZUMO4Q1ZYL8 232 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 FAM222BQ8WU58 562 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 MBD3L1Q8WWY6 194 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 SNX22Q96L94 193 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 P2RX4Q99571 388 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 LHX3Q9UBR4 397 aa11.08□□□□□ -0.64
SMU1-201ENST00000397149 HLA-DRB5Q30154 266 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 OTUD1Q5VV17 481 aaPredicted RBP11.07□□□□□ -0.64
SMU1-201ENST00000397149 MRGPREQ86SM8 312 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 KCNMB2Q9Y691 235 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 CA2P00918 260 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 IGHA1P01876 353 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 IGHA2P01877 340 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 SIX1Q15475 284 aaPredicted RBP11.07□□□□□ -0.64
SMU1-201ENST00000397149 WIPI1Q5MNZ9 446 aaPredicted RBP11.07□□□□□ -0.64
SMU1-201ENST00000397149 LYG2Q86SG7 212 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 A4GALTQ9NPC4 353 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 OR2W5A6NFC9 320 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 EIF4E2O60573 245 aaKnown RBP11.07□□□□□ -0.64
SMU1-201ENST00000397149 GSG1Q2KHT4 349 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 HDAC8Q9BY41 377 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 LOXL3P58215 753 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 RPS4XP62701 263 aaKnown RBP11.07□□□□□ -0.64
SMU1-201ENST00000397149 SELENBP1Q13228 472 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 PRNTQ86SH4 94 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 NAT8Q9UHE5 227 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 CD81P60033 236 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 SLC39A11Q8N1S5 342 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 PIK3IP1Q96FE7 263 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 SLCO1C1Q9NYB5 712 aa11.07□□□□□ -0.64
SMU1-201ENST00000397149 B4E171 279 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 KIR3DL2P43630 455 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 CLDN18P56856 261 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 GPNMBQ14956 572 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 TOMM34Q15785 309 aaPredicted RBP11.06□□□□□ -0.64
SMU1-201ENST00000397149 MAP1LC3B2A6NCE7 125 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 IGHV4-34P06331 123 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 OR10G4Q8NGN3 311 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 OR10G9Q8NGN4 311 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 OR10G7Q8NGN6 311 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 OR5C1Q8NGR4 320 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms