RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TRMT10AQ8TBZ6 339 aaKnown RBP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 AQP3Q92482 292 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 YIPF6Q96EC8 236 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 WDR13Q9H1Z4 485 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 NDUFB11Q9NX14 153 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 FN1P02751 2386 aaKnown RBP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 NF1P21359 2839 aa13.83□□□□□ -0.19
CXCL1-201ENST00000395761 IGKV1-9A0A0C4DH69 117 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 TRBV5-5A0A0J9YX44 114 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 PNMA8CA0A1B0GUJ8 204 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 F5H0A9 414 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-201ENST00000395761 TNFRSF13BO14836 293 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-201ENST00000395761 AKR7A2O43488 359 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 SERPINA3P01011 423 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 MSMBP08118 114 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 GALP22466 123 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 GABRA5P31644 462 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 CD200R1LQ6Q8B3 271 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 UNQ9370/PRO34162Q6UXP9 181 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 ANGPTL5Q86XS5 388 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 FAM90A1Q86YD7 464 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 OR10Z1Q8NGY1 313 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 OR51F2Q8NH61 342 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 GPR148Q8TDV2 347 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 TMIGD2Q96BF3 282 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 C10orf35Q96D05 121 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 NIPBLQ6KC79 2804 aaeCLIP13.83□□□□□ -0.2
CXCL1-201ENST00000395761 MALRD1Q5VYJ5 2156 aa13.83□□□□□ -0.2
CXCL1-201ENST00000395761 SONP18583 2426 aaKnown RBP13.83□□□□□ -0.2
CXCL1-201ENST00000395761 IGKV1-27A0A075B6S5 117 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 TRAV38-1A0A0B4J264 116 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 FAM230AA0A1W2PPH8 454 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 SRRM5B3KS81 715 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 SYNGR1O43759 233 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 SC5DO75845 299 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 GATBO75879 557 aaKnown RBP13.82□□□□□ -0.2
CXCL1-201ENST00000395761 GYPAP02724 150 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 RPS2P15880 293 aaKnown RBP13.82□□□□□ -0.2
CXCL1-201ENST00000395761 ZNF20P17024 532 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 TGFBR2P37173 567 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 HAAOP46952 286 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 DVL1P1P54792 670 aaPredicted RBP13.82□□□□□ -0.2
CXCL1-201ENST00000395761 LCN2P80188 198 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 BLMHQ13867 455 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 TEX36Q5VZQ5 186 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 DCDC5Q6ZRR9 648 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 PP6455Q8WZ26 134 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 TMEM186Q96B77 213 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 HIF1ANQ9NWT6 349 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 MIOXQ9UGB7 285 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 KCNS2Q9ULS6 477 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 SLC7A11Q9UPY5 501 aa13.82□□□□□ -0.2
CXCL1-201ENST00000395761 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.81□□□□□ -0.2
CXCL1-201ENST00000395761 PHF1O43189 567 aaPredicted RBP13.81□□□□□ -0.2
CXCL1-201ENST00000395761 CD36P16671 472 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 ATF1P18846 271 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 SOX2P48431 317 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 RPS25P62851 125 aaKnown RBP13.81□□□□□ -0.2
CXCL1-201ENST00000395761 UTS2BQ765I0 119 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 RNF144BQ7Z419 303 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 ZNF573Q86YE8 665 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 CALHM1Q8IU99 346 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 ZNF671Q8TAW3 534 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 TSEN15Q8WW01 171 aaKnown RBP13.81□□□□□ -0.2
CXCL1-201ENST00000395761 PHYHIPQ92561 330 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 THRSPQ92748 146 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 ZNF488Q96MN9 340 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 SNTG1Q9NSN8 517 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 DHDHQ9UQ10 334 aa13.81□□□□□ -0.2
CXCL1-201ENST00000395761 TRDV1A0A1B0GX56 115 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 KIAA1324LA8MWY0 1029 aaPredicted RBP13.8□□□□□ -0.2
CXCL1-201ENST00000395761 ZNF879B4DU55 563 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 J3QT63 122 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 TFF1P04155 84 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 FUT6P51993 359 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 MICBQ29980 383 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 Q499Y3 187 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 ACSM3Q53FZ2 586 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 ZNF841Q6ZN19 808 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 TMEM91Q6ZNR0 172 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 GDPGP1Q6ZNW5 385 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 GPR141Q7Z602 305 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 GLCCI1Q86VQ1 547 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 BATF2Q8N1L9 274 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 OR5T2Q8NGG2 359 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 OR13C5Q8NGS8 318 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 OR13C9Q8NGT0 318 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 TMEM203Q969S6 136 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 NEIL1Q96FI4 390 aaPredicted RBP13.8□□□□□ -0.2
CXCL1-201ENST00000395761 TECTBQ96PL2 329 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 TMED9Q9BVK6 235 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 ZCCHC4Q9H5U6 513 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 CTSZQ9UBR2 303 aa13.8□□□□□ -0.2
CXCL1-201ENST00000395761 TRBV5-7A0A0A0MS05 114 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 TRAV20A0A0B4J274 112 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 A0A1B0GW55 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 TRAPPC2LH3BP13 241 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 ADAM20O43506 726 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 FOXH1O75593 365 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 OCM2P0CE71 109 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms