RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 PTBP3O95758 552 aaKnown RBP11.1□□□□□ -0.63
PFDN6-204ENST00000395131 HMGN1P05114 100 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 DBTP11182 482 aaKnown RBP11.1□□□□□ -0.63
PFDN6-204ENST00000395131 FPR3P25089 353 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 CDK5Q00535 292 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 RAB40BQ12829 278 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 MLLT11Q13015 90 aaPredicted RBP11.1□□□□□ -0.63
PFDN6-204ENST00000395131 PIN1Q13526 163 aaPredicted RBP11.1□□□□□ -0.63
PFDN6-204ENST00000395131 ENDOGQ14249 297 aaKnown RBP11.1□□□□□ -0.63
PFDN6-204ENST00000395131 SPHARQ15513 63 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 MPPED2Q15777 294 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 SPANXN2Q5MJ10 180 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 ARMC4Q5T2S8 1044 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 TMEM236Q5W0B7 351 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 ZNF730Q6ZMV8 503 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 NANOGP1Q8N7R0 232 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 TCEANCQ8N8B7 351 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 IL4I1Q96RQ9 567 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 TVP23BQ9NYZ1 205 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 SSR3Q9UNL2 185 aa11.1□□□□□ -0.63
PFDN6-204ENST00000395131 M0R3H8 397 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 PRODHO43272 600 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 FMO6PO60774 539 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 CH25HO95992 272 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 NR2C1P13056 603 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 ETV6P41212 452 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 ZNF91Q05481 1191 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 FMODQ06828 376 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 CNN3Q15417 329 aaKnown RBP11.09□□□□□ -0.63
PFDN6-204ENST00000395131 OR8B8Q15620 311 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 SNAPC1Q16533 368 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 RANBP3LQ86VV4 465 aaPredicted RBP11.09□□□□□ -0.63
PFDN6-204ENST00000395131 MRPL41Q8IXM3 137 aaKnown RBP11.09□□□□□ -0.63
PFDN6-204ENST00000395131 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 OR6T1Q8NGN1 323 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 TMEM163Q8TC26 289 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 ACOT11Q8WXI4 607 aaPredicted RBP11.09□□□□□ -0.63
PFDN6-204ENST00000395131 ST8SIA4Q92187 359 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 RPL3LQ92901 407 aaKnown RBP11.09□□□□□ -0.63
PFDN6-204ENST00000395131 CEP19Q96LK0 163 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 CHCHD6Q9BRQ6 235 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 C6orf62Q9GZU0 229 aaPredicted RBP11.09□□□□□ -0.63
PFDN6-204ENST00000395131 NUAK2Q9H093 628 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 FGF20Q9NP95 211 aaPredicted RBP11.09□□□□□ -0.63
PFDN6-204ENST00000395131 STUB1Q9UNE7 303 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 KIAA1109Q2LD37 5005 aa11.09□□□□□ -0.63
PFDN6-204ENST00000395131 A0A1W2PRG6 482 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 TCRBV4S1A1TA0A5B7 111 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 NKX6-3A6NJ46 265 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 C12orf71A8MTZ7 269 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 MCIDASD6RGH6 385 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 F2RL2O00254 374 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 MAGEB3O15480 346 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 SYNGR1O43759 233 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 UPK1BO75841 260 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 APOA1P02647 267 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 GYPAP02724 150 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 DAP3P51398 398 aaKnown RBP11.08□□□□□ -0.64
PFDN6-204ENST00000395131 RORCP51449 518 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 RGS8P57771 180 aaPredicted RBP11.08□□□□□ -0.64
PFDN6-204ENST00000395131 PRAMEF6Q5VXH4 476 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 TEX36Q5VZQ5 186 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 HCP5Q6MZN7 132 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 RPL13AP3Q6NVV1 102 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 FAM90A1Q86YD7 464 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 RBM45Q8IUH3 476 aaKnown RBP11.08□□□□□ -0.64
PFDN6-204ENST00000395131 RNF113BQ8IZP6 322 aaKnown RBP11.08□□□□□ -0.64
PFDN6-204ENST00000395131 FGFRL1Q8N441 504 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 OR4D11Q8NGI4 311 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 OR5L1Q8NGL2 311 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 OR5M11Q96RB7 305 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 COQ7Q99807 217 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 CCDC32Q9BV29 185 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 OR51E2Q9H255 320 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 METTL8Q9H825 291 aaKnown RBP11.08□□□□□ -0.64
PFDN6-204ENST00000395131 UFSP2Q9NUQ7 469 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 DNAJC27Q9NZQ0 273 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 H2AFY2Q9P0M6 372 aaPredicted RBP11.08□□□□□ -0.64
PFDN6-204ENST00000395131 DNAJB11Q9UBS4 358 aa11.08□□□□□ -0.64
PFDN6-204ENST00000395131 SF3B6Q9Y3B4 125 aaKnown RBP11.08□□□□□ -0.64
PFDN6-204ENST00000395131 NPIPB13A6NJU9 1138 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 NPIPB4C9JG80 1138 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 SOX14O95416 240 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 PTTG1O95997 202 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 HIST1H2ABP04908 130 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 ALDOBP05062 364 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 PAICSP22234 425 aaKnown RBP11.07□□□□□ -0.64
PFDN6-204ENST00000395131 HTR5AP47898 357 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 MBOAT2Q6ZWT7 520 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 HIST3H2AQ7L7L0 130 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 ZBTB46Q86UZ6 589 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 HIST1H2ACQ93077 130 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 OPALINQ96PE5 141 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 MCHR1Q99705 422 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 NDUFB11Q9NX14 153 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
PFDN6-204ENST00000395131 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms