RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 KCNS2Q9ULS6 477 aa13.55□□□□□ -0.24
TGFA-202ENST00000394241 IGKV1-9A0A0C4DH69 117 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 J3QT63 122 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 SULT1B1O43704 296 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 HNF1AP20823 631 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 MAPK3P27361 379 aaPredicted RBP13.54□□□□□ -0.24
TGFA-202ENST00000394241 RBMXP38159 391 aaKnown RBP13.54□□□□□ -0.24
TGFA-202ENST00000394241 MDH2P40926 338 aaKnown RBP13.54□□□□□ -0.24
TGFA-202ENST00000394241 RPS11P62280 158 aaKnown RBP eCLIP13.54□□□□□ -0.24
TGFA-202ENST00000394241 TPBGQ13641 420 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 FAM166AQ6J272 317 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 HAGHLQ6PII5 290 aaPredicted RBP13.54□□□□□ -0.24
TGFA-202ENST00000394241 LHFPL2Q6ZUX7 228 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 C11orf53Q8IXP5 236 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 MUC20Q8N307 709 aaPredicted RBP13.54□□□□□ -0.24
TGFA-202ENST00000394241 DNAAF1Q8NEP3 725 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 OR10Z1Q8NGY1 313 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 OR14A2Q96R54 314 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 GAL3ST1Q99999 423 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 TMED9Q9BVK6 235 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 TAS2R4Q9NYW5 299 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 POLDIP2Q9Y2S7 368 aa13.54□□□□□ -0.24
TGFA-202ENST00000394241 PPIAL4EA0A075B759 164 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 ZNF879B4DU55 563 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 PPIAL4DF5H284 164 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 PPIAL4FP0DN26 164 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 CPEP16870 476 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 RAB3AP20336 220 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 PCMT1P22061 227 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 CD80P33681 288 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 RBP2P50120 134 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 ATP1B3P54709 279 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 PPP3R1P63098 170 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 ZMYND11Q15326 602 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 TMEM155Q4W5P6 130 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 UBE2UQ5VVX9 321 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 SPICQ8N5J4 248 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 GCSAMQ8N6F7 178 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 BOLLQ8N9W6 283 aaKnown RBP13.53□□□□□ -0.24
TGFA-202ENST00000394241 CLDND2Q8NHS1 167 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 CKLFQ9UBR5 152 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 PPIAL4AQ9Y536 164 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 TENM1Q9UKZ4 2725 aa13.53□□□□□ -0.24
TGFA-202ENST00000394241 TGP01266 2768 aa13.52□□□□□ -0.24
TGFA-202ENST00000394241 SRRM5B3KS81 715 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 WNT9BO14905 357 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 TCF21O43680 179 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 ALX3O95076 343 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 ZNF205O95201 554 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 FSTL3O95633 263 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 HCKP08631 526 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 FSTP19883 344 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 PSMA1P25786 263 aaKnown RBP13.52□□□□□ -0.25
TGFA-202ENST00000394241 PSMB9P28065 219 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 CFHR2P36980 270 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 GZMKP49863 264 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 TRAM1Q15629 374 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 KCNJ8Q15842 424 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 ARMCX4Q5H9R4 360 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 FAM201AQ5SY85 155 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 ZNF671Q8TAW3 534 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 AQP3Q92482 292 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 RAB39BQ96DA2 213 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 CPNE2Q96FN4 548 aaPredicted RBP13.52□□□□□ -0.25
TGFA-202ENST00000394241 DERL3Q96Q80 235 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 PKIBQ9C010 78 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 METTL17Q9H7H0 456 aaPredicted RBP13.52□□□□□ -0.25
TGFA-202ENST00000394241 ZNF696Q9H7X3 374 aa13.52□□□□□ -0.25
TGFA-202ENST00000394241 IGKV1-27A0A075B6S5 117 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 A0A087WXM4 84 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 TRBV5-7A0A0A0MS05 114 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 OOEPA6NGQ2 149 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 LGALS8O00214 317 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 MAGEB3O15480 346 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 AKR7A2O43488 359 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 RHBDL1O75783 438 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 LHBP01229 141 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 EGR1P18146 543 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 MPZP25189 248 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 MTCP1P56278 107 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 ZNF404Q494X3 552 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 ASPHD2Q6ICH7 369 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 ZNF529Q6P280 563 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 LRRC28Q86X40 367 aaPredicted RBP13.51□□□□□ -0.25
TGFA-202ENST00000394241 CALHM1Q8IU99 346 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 C1orf159Q96HA4 380 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 ZNF665Q9H7R5 613 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 VCX3AQ9NNX9 186 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 PCDHB10Q9UN67 800 aa13.51□□□□□ -0.25
TGFA-202ENST00000394241 TRAV38-1A0A0B4J264 116 aa13.5□□□□□ -0.25
TGFA-202ENST00000394241 C3orf80F5H4A9 247 aa13.5□□□□□ -0.25
TGFA-202ENST00000394241 SYNGR1O43759 233 aa13.5□□□□□ -0.25
TGFA-202ENST00000394241 PLATP00750 562 aa13.5□□□□□ -0.25
TGFA-202ENST00000394241 IGHV2-5P01817 119 aa13.5□□□□□ -0.25
TGFA-202ENST00000394241 GABRA5P31644 462 aa13.5□□□□□ -0.25
TGFA-202ENST00000394241 POU3F4P49335 361 aa13.5□□□□□ -0.25
TGFA-202ENST00000394241 RPS25P62851 125 aaKnown RBP13.5□□□□□ -0.25
TGFA-202ENST00000394241 HOXA4Q00056 320 aaPredicted RBP13.5□□□□□ -0.25
TGFA-202ENST00000394241 IL24Q13007 206 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms