RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 TANC2Q9HCD6 1990 aa16.31■□□□□ 0.2
PSEN1-203ENST00000394157 CHD3Q12873 2000 aaKnown RBP16.3■□□□□ 0.2
PSEN1-203ENST00000394157 IGHV3-64DA0A0J9YX35 117 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 hCG_1807616A0A1W2PRN6 198 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 CLDN25C9JDP6 229 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 TMEM178BH3BS89 294 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 LY6HO94772 140 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 GIFP27352 417 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 PMELP40967 661 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 TMBIM6P55061 237 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 RIN1Q13671 783 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 CLEC2AQ6UVW9 174 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 SLC16A12Q6ZSM3 486 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 ANGPTL5Q86XS5 388 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 LYPD6Q86Y78 171 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 Q8IYB0 196 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 JAGN1Q8N5M9 183 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 PXT1Q8NFP0 134 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 ZNF420Q8TAQ5 688 aaPredicted RBP16.3■□□□□ 0.2
PSEN1-203ENST00000394157 RAB2BQ8WUD1 216 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 TIMD4Q96H15 378 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 SPACA5Q96QH8 159 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 RASL12Q9NYN1 266 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 NPTNQ9Y639 398 aa16.3■□□□□ 0.2
PSEN1-203ENST00000394157 ARID1AO14497 2285 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 SRRM5B3KS81 715 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 LHBP01229 141 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 RAB3BP20337 219 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 PTGFRP43088 359 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 ZP1P60852 638 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 CTF1Q16619 201 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 SHEQ5VZ18 495 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 CRIP3Q6Q6R5 217 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 DNM1P46Q6ZS02 220 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 SLC25A26Q70HW3 274 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 CLVS1Q8IUQ0 354 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-203ENST00000394157 LRRC29Q8WV35 223 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 RAB1CQ92928 201 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 PCDHB16Q9NRJ7 776 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 V9GY05 133 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 DYSFO75923 2080 aa16.29■□□□□ 0.2
PSEN1-203ENST00000394157 PDZD2O15018 2839 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 NOL3O60936 208 aaKnown RBP16.28■□□□□ 0.2
PSEN1-203ENST00000394157 TMEM127O75204 238 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 PGA5P0DJD9 388 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 TMEM225BP0DP42 221 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 CFPP27918 469 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 POU3F4P49335 361 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 C1orf100Q5SVJ3 147 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 ASCL4Q6XD76 172 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 ZNF826PQ6ZT77 177 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 ZNF525Q8N782 197 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 POC1AQ8NBT0 407 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 OR6M1Q8NGM8 313 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 OR51F2Q8NH61 342 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 TNFAIP8L1Q8WVP5 186 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 FAM168AQ92567 244 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 S100A13Q99584 98 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 GHRLQ9UBU3 117 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 AK6Q9Y3D8 172 aaKnown RBP16.28■□□□□ 0.2
PSEN1-203ENST00000394157 CACNG2Q9Y698 323 aa16.28■□□□□ 0.2
PSEN1-203ENST00000394157 SHISA3A0PJX4 238 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 LYNX1G3V0Z9 82 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 TRAPPC2LH3BP13 241 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 SYNGR1O43759 233 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 ZNF780AO75290 641 aaPredicted RBP16.27■□□□□ 0.2
PSEN1-203ENST00000394157 RHBDL1O75783 438 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 UBBP0CG47 229 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 LYNX1P0DP58 116 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 SDC2P34741 201 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 BMXP51813 675 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 CAPZA1P52907 286 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 FAM90A1Q86YD7 464 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 GCSAMQ8N6F7 178 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 RFT1Q96AA3 541 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 CEP19Q96LK0 163 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 NRIP2Q9BQI9 281 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 CNTD2Q9H8S5 307 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 TREM2Q9NZC2 230 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 IL36GQ9NZH8 169 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 NDUFA13Q9P0J0 144 aa16.27■□□□□ 0.2
PSEN1-203ENST00000394157 PPIAL4EA0A075B759 164 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 NOTOA8MTQ0 251 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 PPIAL4DF5H284 164 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 SLC17A2O00624 439 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 KDM4BO94953 1096 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 CYB5R3P00387 301 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-203ENST00000394157 IL1AP01583 271 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 PPIAL4FP0DN26 164 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 MUC1P15941 1255 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-203ENST00000394157 HTR2CP28335 458 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 GPR6P46095 362 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-203ENST00000394157 ERVK11-1P61568 191 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 LSM3P62310 102 aaKnown RBP16.26■□□□□ 0.19
PSEN1-203ENST00000394157 GPR176Q14439 515 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 KCNJ8Q15842 424 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 CARTPTQ16568 116 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 CLEC12BQ2HXU8 276 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 TGIF2LYQ8IUE0 185 aa16.26■□□□□ 0.19
PSEN1-203ENST00000394157 CROCCP3Q8IVE0 287 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms