RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MRPS34P82930 218 aaKnown RBP12.47□□□□□ -0.41
CLCN4-201ENST00000380829 PMPCAQ10713 525 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 RSPO1Q2MKA7 263 aaPredicted RBP12.47□□□□□ -0.41
CLCN4-201ENST00000380829 GALNTL5Q7Z4T8 443 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 ACBD4Q8NC06 268 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 CPNE4Q96A23 557 aaPredicted RBP12.47□□□□□ -0.41
CLCN4-201ENST00000380829 FOXRED1Q96CU9 486 aaPredicted RBP12.47□□□□□ -0.41
CLCN4-201ENST00000380829 FER1L6-AS2Q96M78 137 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 CLCC1Q96S66 551 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 ARGFXA6NJG6 315 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 PATE4P0C8F1 98 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 NQO2P16083 231 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 AGTR1P30556 359 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 PRSS3P35030 304 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 FAUP35544 74 aaKnown RBP12.47□□□□□ -0.41
CLCN4-201ENST00000380829 LHX2P50458 406 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 F2RL1P55085 397 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 ZNF124Q15973 351 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 FAM27BQ5VT28 67 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 ZNF529Q6P280 563 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 DTX1Q86Y01 620 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 GPR137CQ8N3F9 429 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 LYZL4Q96KX0 146 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 RNF122Q9H9V4 155 aa12.47□□□□□ -0.41
CLCN4-201ENST00000380829 GPR37O15354 613 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 IGHV3-9P01782 118 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 CD3DP04234 171 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 HPNP05981 417 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 OR4E1P0C645 316 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 CTSSP25774 331 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 ZNF93P35789 620 aaPredicted RBP12.46□□□□□ -0.41
CLCN4-201ENST00000380829 HIST1H3AP68431 136 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 PLGLB1Q02325 96 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 ZNF345Q14585 488 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 HIST2H3PS2Q5TEC6 136 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 C11orf87Q6NUJ2 197 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 CDPF1Q6NVV7 123 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 HIST2H3AQ71DI3 136 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 DOK3Q7L591 496 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 DMRTC2Q8IXT2 367 aaPredicted RBP12.46□□□□□ -0.41
CLCN4-201ENST00000380829 GALNT16Q8N428 558 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 TMEM251Q8N6I4 163 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 ARL11Q969Q4 196 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 PHYHIPLQ96FC7 376 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 RHOVQ96L33 236 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 IP6K3Q96PC2 410 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 TMEM38BQ9NVV0 291 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 PLEKHA6Q9Y2H5 1048 aa12.46□□□□□ -0.41
CLCN4-201ENST00000380829 M0R135 149 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 CYTIPO60759 359 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 OR2F2O95006 317 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 ITGB2P05107 769 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 OR8U8P0C7N1 319 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 CCL1P22362 96 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 SRSF6Q13247 344 aaKnown RBP12.46□□□□□ -0.42
CLCN4-201ENST00000380829 UNC119Q13432 240 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 OR2F1Q13607 317 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 AWAT2Q6E213 333 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 LIN54Q6MZP7 749 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 VASH2Q86V25 355 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 OR5AS1Q8N127 324 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 PAQR4Q8N4S7 273 aaPredicted RBP12.46□□□□□ -0.42
CLCN4-201ENST00000380829 ZNF799Q96GE5 643 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 SEC11CQ9BY50 192 aa12.46□□□□□ -0.42
CLCN4-201ENST00000380829 ZNF729A6NN14 1252 aaPredicted RBP12.45□□□□□ -0.42
CLCN4-201ENST00000380829 FOLR2P14207 255 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 CLDN18P56856 261 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 TMEM200AQ86VY9 491 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 ANGPTL5Q86XS5 388 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 OR14K1Q8NGZ2 314 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 PPP1R1CQ8WVI7 109 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 HIST1H2BAQ96A08 127 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 CMBLQ96DG6 245 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 CD8AP01732 235 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 HCKP08631 526 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 VSIG8P0DPA2 414 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 MEOX1P50221 254 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 ZNF774Q6NX45 483 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 OR5M8Q8NGP6 311 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 CPT1CQ8TCG5 803 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 TMED6Q8WW62 240 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 SPOCK3Q9BQ16 436 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 NRIP2Q9BQI9 281 aa12.45□□□□□ -0.42
CLCN4-201ENST00000380829 ZNF407Q9C0G0 2248 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 CFAP47Q6ZTR5 3102 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 TMEM235A6NFC5 223 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 FGF16O43320 207 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 ERCC1P07992 297 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-201ENST00000380829 SP1P08047 785 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 CSF1P09603 554 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 ZNF14P17017 642 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-201ENST00000380829 CPT2P23786 658 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 OTX1P32242 354 aaPredicted RBP12.44□□□□□ -0.42
CLCN4-201ENST00000380829 C3AR1Q16581 482 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 SNAI3Q3KNW1 292 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 NCMAPQ5T1S8 102 aa12.44□□□□□ -0.42
CLCN4-201ENST00000380829 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms