RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LRCH1Q9Y2L9 728 aa11.08□□□□□ -0.64
CKAP2-202ENST00000378034 IGKV1-27A0A075B6S5 117 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 PNMA8CA0A1B0GUJ8 204 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 FAM157AC9JC47 383 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 TNFRSF13BO14836 293 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 AKR7A2O43488 359 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 FOXH1O75593 365 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 GPX5O75715 221 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 PGA5P0DJD9 388 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 RPS2P15880 293 aaKnown RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 GLRA1P23415 457 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 MAPK3P27361 379 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 DVL1P1P54792 670 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 MTCP1P56278 107 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 KCTD21Q4G0X4 260 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 FAM166AQ6J272 317 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 CALHM1Q8IU99 346 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 OR8B3Q8NGG8 313 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 NEIL1Q96FI4 390 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 OR8B2Q96RD0 313 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 DNTTIP1Q9H147 329 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ACOT13Q9NPJ3 140 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 KAAG1Q9UBP8 84 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 DNAJB11Q9UBS4 358 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ZANQ9Y493 2812 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ZNF879B4DU55 563 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 MAGEB3O15480 346 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 CYB5AP00167 134 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 TGFAP01135 160 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ALDOBP05062 364 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 MSMBP08118 114 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ZNF16P17020 682 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 MAP2K4P45985 399 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 PPP3R1P63098 170 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 TRAM1Q15629 374 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ESCO2Q56NI9 601 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ATPAF1Q5TC12 328 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-202ENST00000378034 ANGPTL5Q86XS5 388 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 MKXQ8IYA7 352 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 C19orf18Q8NEA5 215 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 TMIGD2Q96BF3 282 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 MGLLQ99685 303 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 CKLFQ9UBR5 152 aa11.07□□□□□ -0.64
CKAP2-202ENST00000378034 TRBV5-7A0A0A0MS05 114 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 TRAV20A0A0B4J274 112 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 A8MXK9 166 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 SYNGR1O43759 233 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 HCKP08631 526 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 HSMCR30P0CW71 290 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 CPEP16870 476 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 FSTP19883 344 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 PCMT1P22061 227 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 PSMA1P25786 263 aaKnown RBP11.06□□□□□ -0.64
CKAP2-202ENST00000378034 NPY4RP50391 375 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 EMX1Q04741 257 aaPredicted RBP11.06□□□□□ -0.64
CKAP2-202ENST00000378034 SMIM21Q3B7S5 101 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 Q8IYB0 196 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 SPARTQ8N0X7 666 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 OR13C5Q8NGS8 318 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 FCGR1BQ92637 280 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 NRIP2Q9BQI9 281 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 YAE1D1Q9NRH1 226 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 TMEM160Q9NX00 188 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 TAS2R4Q9NYW5 299 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 NLKQ9UBE8 527 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 KCNS2Q9ULS6 477 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 POLR3KQ9Y2Y1 108 aaPredicted RBP11.06□□□□□ -0.64
CKAP2-202ENST00000378034 ABCA1O95477 2261 aa11.06□□□□□ -0.64
CKAP2-202ENST00000378034 PPIAL4CA0A0B4J2A2 164 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 A8MV72 311 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-202ENST00000378034 GYPAP02724 150 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 IGFBP3P17936 291 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-202ENST00000378034 ERVK11-1P61568 191 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 HOXA4Q00056 320 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-202ENST00000378034 C11orf91Q3C1V1 193 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 STUMQ69YW2 141 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 ZNF773Q6PK81 442 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 UNQ9370/PRO34162Q6UXP9 181 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 SLC36A1Q7Z2H8 476 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 SAXO1Q8IYX7 474 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 DERL3Q96Q80 235 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 OR14A2Q96R54 314 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 WDR13Q9H1Z4 485 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 RHOFQ9HBH0 211 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 HES4Q9HCC6 221 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 TMEM138Q9NPI0 162 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 FOXJ3Q9UPW0 622 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■■■■ 38.2
CKAP2-202ENST00000378034 ABCA2Q9BZC7 2435 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 IGHV3OR15-7A0A075B7D8 119 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 ADAM20O43506 726 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 NXPH2O95156 264 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 GATA3P23771 443 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 TGFBR2P37173 567 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 PITPNBP48739 271 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 PDZK1IP1Q13113 114 aa11.05□□□□□ -0.64
CKAP2-202ENST00000378034 KISS1Q15726 138 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms