RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 C1orf147Q96MC9 270 aaPredicted RBP12.23□□□□□ -0.45
MSH5-202ENST00000375740 NRIP2Q9BQI9 281 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 SLC25A21Q9BQT8 299 aaPredicted RBP12.23□□□□□ -0.45
MSH5-202ENST00000375740 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
MSH5-202ENST00000375740 UPB1Q9UBR1 384 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 FLVCR1Q9Y5Y0 555 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 CNTRLQ7Z7A1 2325 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 A0A0B4J2A0 478 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 CLN5O75503 358 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 IGLV3-1P01715 115 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 DBHP09172 617 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 FAM157CP0CG43 387 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 RNF224P0DH78 156 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 NKPD1Q17RQ9 610 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 SCGB2B2Q4G0G5 96 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 SPINK14Q6IE38 97 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 FAM219AQ8IW50 185 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 SKA3Q8IX90 412 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 GPER1Q99527 375 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 LPAR5Q9H1C0 372 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 BANF2Q9H503 90 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
MSH5-202ENST00000375740 PLEK2Q9NYT0 353 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 SHPKQ9UHJ6 478 aa12.23□□□□□ -0.45
MSH5-202ENST00000375740 DOCK10Q96BY6 2186 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 CCDC187A0A096LP49 1063 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 EEF1E1-BLOC1S5C9J1V9 151 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 MPIG6BO95866 241 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 HLA-AP01891 365 aaKnown RBP12.22□□□□□ -0.45
MSH5-202ENST00000375740 MRPS34P82930 218 aaKnown RBP12.22□□□□□ -0.45
MSH5-202ENST00000375740 FAM27BQ5VT28 67 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 OR52W1Q6IF63 320 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 HIST1H2BAQ96A08 127 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 PIK3IP1Q96FE7 263 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 RNF122Q9H9V4 155 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 A0A0A6YYD4 124 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 ZNF716A6NP11 495 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 C1orf196B1AJZ1 125 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 CDX4O14627 284 aaPredicted RBP12.22□□□□□ -0.45
MSH5-202ENST00000375740 AGPAT2O15120 278 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 NQO2P16083 231 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 GDF1P27539 372 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 CLDN15P56746 228 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 TSC22D1Q15714 1073 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 NKAPLQ5M9Q1 402 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 ISOC2Q96AB3 205 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 CRLF2Q9HC73 371 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 TMEM100Q9NV29 134 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 PCDHGA1Q9Y5H4 931 aa12.22□□□□□ -0.45
MSH5-202ENST00000375740 RTTNQ86VV8 2226 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 A0A0U1RQV5 110 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 A0A1W2PP11 408 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 GATCO43716 136 aaKnown RBP12.21□□□□□ -0.45
MSH5-202ENST00000375740 CDC14BO60729 498 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 SCGNO76038 276 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 PRF1P14222 555 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
MSH5-202ENST00000375740 GSK3AP49840 483 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 CXADRP78310 365 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 HGFACQ04756 655 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 TMEM200AQ86VY9 491 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 OR13C8Q8NGS7 320 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 OR10D3Q8NH80 312 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 KCNG3Q8TAE7 436 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 SSC4DQ8WTU2 575 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 CCDC107Q8WV48 283 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 ADGRG7Q96K78 797 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 LRFN1Q9P244 771 aa12.21□□□□□ -0.45
MSH5-202ENST00000375740 M0R135 149 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 SOCS1O15524 211 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 CHRM2P08172 466 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 OR8U8P0C7N1 319 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 FOLR2P14207 255 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 PJVKQ0ZLH3 352 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 MEF2DQ14814 521 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 RNASE10Q5GAN6 216 aaKnown RBP12.21□□□□□ -0.46
MSH5-202ENST00000375740 CDPF1Q6NVV7 123 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 AAED1Q7RTV5 226 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 INO80EQ8NBZ0 244 aaPredicted RBP12.21□□□□□ -0.46
MSH5-202ENST00000375740 NPRL2Q8WTW4 380 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 RRNAD1Q96FB5 475 aaKnown RBP12.21□□□□□ -0.46
MSH5-202ENST00000375740 ZNF799Q96GE5 643 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 NUDT16L1Q9BRJ7 211 aaKnown RBP12.21□□□□□ -0.46
MSH5-202ENST00000375740 EDEM2Q9BV94 578 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 RHOFQ9HBH0 211 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 VSIG4Q9Y279 399 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 MRPS18CQ9Y3D5 142 aaKnown RBP12.21□□□□□ -0.46
MSH5-202ENST00000375740 V9GYS6 101 aa12.21□□□□□ -0.46
MSH5-202ENST00000375740 DHRS3O75911 302 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 FAHP16930 419 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 FOXO1Q12778 655 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 UBE2V2Q15819 145 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 OR2B11Q5JQS5 317 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 CDCP2Q5VXM1 449 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 SPTSSAQ969W0 71 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 LOXL4Q96JB6 756 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 CYTL1Q9NRR1 136 aa12.2□□□□□ -0.46
MSH5-202ENST00000375740 CRTAPO75718 401 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms