RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ZNF283Q8N7M2 679 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 MFSD8Q8NHS3 518 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF2Q9BSG1 426 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-203ENST00000374877 IGHV3-20A0A0C4DH32 117 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 RER1O15258 196 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 HPNP05981 417 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 ACER2Q5QJU3 275 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 GGNBP1Q5YKI7 109 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 SEMA6DQ8NFY4 1073 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 BSCL2Q96G97 398 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-203ENST00000374877 SERINC1Q9NRX5 453 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 TINAGQ9UJW2 476 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 STARD10Q9Y365 291 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 OR13C7P0DN81 318 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 MYF5P13349 255 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 SULT1A1P50225 295 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 FAM3AP98173 230 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 ZP4Q12836 540 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 MFAP5Q13361 173 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 FAM189A2Q15884 450 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 LPAL2Q16609 132 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 LANCL3Q6ZV70 420 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 TMPRSS9Q7Z410 1059 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF565Q8N9K5 539 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 BCL2L14Q9BZR8 327 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 H3BMH7 237 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 STMND1H3BQB6 276 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 XRCC2O43543 280 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 EIF2S3P41091 472 aaKnown RBP9.73□□□□□ -0.85
CCDC40-203ENST00000374877 FBXW4P57775 412 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 FOXF1Q12946 379 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 OR1N1Q8NGS0 311 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 LIN37Q96GY3 246 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-203ENST00000374877 S100A13Q99584 98 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 KCNJ16Q9NPI9 418 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 LUZP4Q9P127 313 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 MYO7BQ6PIF6 2116 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 COL6A3P12111 3177 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 MYO15AQ9UKN7 3530 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 IGKV1D-8A0A087WSZ0 117 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 IGKV1-9A0A0C4DH69 117 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 DIRAS3O95661 229 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 GLI4P10075 376 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF17P17021 662 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 ITGA3P26006 1051 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 GABREP78334 506 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 SP6Q3SY56 376 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 TOMM40LQ969M1 308 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 DDIT4LQ96D03 193 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 MVB12AQ96EY5 273 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 PECRQ9BY49 303 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 MOB1AQ9H8S9 216 aa9.73□□□□□ -0.85
CCDC40-203ENST00000374877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC40-203ENST00000374877 SDK1Q7Z5N4 2213 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 AP4M1O00189 453 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF205O95201 554 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 THBS4P35443 961 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 CCL7P80098 99 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 KISS1Q15726 138 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 RPUSD3Q6P087 351 aaKnown RBP9.72□□□□□ -0.85
CCDC40-203ENST00000374877 UBAC2Q8NBM4 344 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 IFI44Q8TCB0 444 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 EDARADDQ8WWZ3 215 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 SPSB2Q99619 263 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 HDHD3Q9BSH5 251 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-203ENST00000374877 R4GN57 208 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 BORCS7-ASMTA0A0B4J1R7 106 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 A0A1W2PQM1 296 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 VSTM2BA6NLU5 285 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 IGHV2-5P01817 119 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 FBLP22087 321 aaKnown RBP9.72□□□□□ -0.85
CCDC40-203ENST00000374877 GABRR1P24046 479 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 C6orf201Q7Z4U5 140 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 OR1J1Q8NGS3 322 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 LYPD6BQ8NI32 183 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 SLC25A43Q8WUT9 341 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-203ENST00000374877 SLC39A7Q92504 469 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 TAAR9Q96RI9 348 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 PUS1Q9Y606 427 aaKnown RBP eCLIP9.72□□□□□ -0.85
CCDC40-203ENST00000374877 ASXL3Q9C0F0 2248 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 ZDBF2Q9HCK1 2354 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 DHRS7CA6NNS2 312 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 SH3BGRL3Q9H299 93 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 TUBA4BQ9H853 241 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 C19orf12Q9NSK7 152 aa9.72□□□□□ -0.85
CCDC40-203ENST00000374877 C5orf63A6NC05 138 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 DANCRP0C864 163 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 SURF2Q15527 256 aaPredicted RBP9.71□□□□□ -0.85
CCDC40-203ENST00000374877 THEM4Q5T1C6 240 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 DOK3Q7L591 496 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 UEVLDQ8IX04 471 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 AKR7LQ8NHP1 331 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 ST8SIA1Q92185 356 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 VN1R1Q9GZP7 353 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 PLEKHA2Q9HB19 425 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 PADI1Q9ULC6 663 aa9.71□□□□□ -0.85
CCDC40-203ENST00000374877 ASCC3Q8N3C0 2202 aaKnown RBP9.71□□□□□ -0.85
CCDC40-203ENST00000374877 ANKUB1A6NFN9 424 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms