RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PRKACBP22694 351 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 GLRA1P23415 457 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 SOX2P48431 317 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 RBP2P50120 134 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 SEC61A1P61619 476 aaKnown RBP13.35□□□□□ -0.27
HDHD3-202ENST00000374180 LCN2P80188 198 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 PARP16Q8N5Y8 322 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 DNAAF1Q8NEP3 725 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 OR8B3Q8NGG8 313 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 RGP1Q92546 391 aaPredicted RBP13.35□□□□□ -0.27
HDHD3-202ENST00000374180 SPSB1Q96BD6 273 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 SEH1LQ96EE3 360 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 OR8B2Q96RD0 313 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 WDR13Q9H1Z4 485 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 POLDIP2Q9Y2S7 368 aa13.35□□□□□ -0.27
HDHD3-202ENST00000374180 WNK2Q9Y3S1 2297 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 ANK3Q12955 4377 aaKnown RBP13.34□□□□□ -0.27
HDHD3-202ENST00000374180 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.34□□□□□ -0.27
HDHD3-202ENST00000374180 TNFRSF13BO14836 293 aaPredicted RBP13.34□□□□□ -0.27
HDHD3-202ENST00000374180 ADAM20O43506 726 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 MT-ND2P03891 347 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 PCMT1P22061 227 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 AZGP1P25311 298 aaKnown RBP13.34□□□□□ -0.27
HDHD3-202ENST00000374180 ZFP36P26651 326 aaKnown RBP13.34□□□□□ -0.27
HDHD3-202ENST00000374180 ATP1B3P54709 279 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 MTCP1P56278 107 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 IRF3Q14653 427 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 SPHARQ15513 63 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 MED22Q15528 200 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 PRSS48Q7RTY5 328 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 CALHM1Q8IU99 346 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 OR5T2Q8NGG2 359 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 OR13C9Q8NGT0 318 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 C12orf43Q96C57 262 aaKnown RBP13.34□□□□□ -0.27
HDHD3-202ENST00000374180 SSBP3Q9BWW4 388 aaPredicted RBP13.34□□□□□ -0.27
HDHD3-202ENST00000374180 NEK6Q9HC98 313 aa13.34□□□□□ -0.27
HDHD3-202ENST00000374180 IGKV1-27A0A075B6S5 117 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 PHF1O43189 567 aaPredicted RBP13.33□□□□□ -0.28
HDHD3-202ENST00000374180 SYNGR1O43759 233 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 MPZP25189 248 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 PITPNBP48739 271 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 GNB2P62879 340 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 BDH1Q02338 343 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 ACSM1Q08AH1 577 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 IL24Q13007 206 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 YIF1BQ5BJH7 314 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 FAHD2BQ6P2I3 314 aaPredicted RBP13.33□□□□□ -0.28
HDHD3-202ENST00000374180 LHFPL2Q6ZUX7 228 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 TMEM106AQ96A25 262 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 TMIGD2Q96BF3 282 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 FAHD2AQ96GK7 314 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 PGLYRP3Q96LB9 341 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 OR5M11Q96RB7 305 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 PKIBQ9C010 78 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 SNTG1Q9NSN8 517 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 TMEM160Q9NX00 188 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 RASL12Q9NYN1 266 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 CLN8Q9UBY8 286 aa13.33□□□□□ -0.28
HDHD3-202ENST00000374180 ARHGAP32A7KAX9 2087 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 TMPRSS2O15393 492 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 NOS1APO75052 506 aaPredicted RBP13.32□□□□□ -0.28
HDHD3-202ENST00000374180 ALX3O95076 343 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 PLATP00750 562 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 ACAA1P09110 424 aaPredicted RBP13.32□□□□□ -0.28
HDHD3-202ENST00000374180 PGA5P0DJD9 388 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 DOC2BQ14184 412 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 CR1LQ2VPA4 569 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 POC1AQ8NBT0 407 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 OR13C5Q8NGS8 318 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 ZNF488Q96MN9 340 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 CCL13Q99616 98 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 NLKQ9UBE8 527 aa13.32□□□□□ -0.28
HDHD3-202ENST00000374180 LSM2Q9Y333 95 aaKnown RBP13.32□□□□□ -0.28
HDHD3-202ENST00000374180 A8MXK9 166 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 SULT1B1O43704 296 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 NXPH2O95156 264 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 CYB5AP00167 134 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 CD1AP06126 327 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 RAB3AP20336 220 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 FAM120AOSQ5T036 256 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 ATPAF1Q5TC12 328 aaPredicted RBP13.31□□□□□ -0.28
HDHD3-202ENST00000374180 DCAF12L2Q5VW00 463 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 WDR25Q64LD2 544 aaPredicted RBP13.31□□□□□ -0.28
HDHD3-202ENST00000374180 STUMQ69YW2 141 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 ZNF841Q6ZN19 808 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 SLC25A26Q70HW3 274 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 SLC36A1Q7Z2H8 476 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 FAM192AQ9GZU8 254 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 SHARPINQ9H0F6 387 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 KAAG1Q9UBP8 84 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 CTSZQ9UBR2 303 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 OR5V1Q9UGF6 321 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 CDC42EP3Q9UKI2 254 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
HDHD3-202ENST00000374180 DOCK11Q5JSL3 2073 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 C2CD3Q4AC94 2353 aa13.31□□□□□ -0.28
HDHD3-202ENST00000374180 PPIAL4CA0A0B4J2A2 164 aa13.3□□□□□ -0.28
HDHD3-202ENST00000374180 A0A0G2JMP0 313 aa13.3□□□□□ -0.28
HDHD3-202ENST00000374180 TRBV5-5A0A0J9YX44 114 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms