RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 LURAP1Q96LR2 239 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 NAA11Q9BSU3 229 aaPredicted RBP13.35□□□□□ -0.27
PTBP1-203ENST00000356948 GPR173Q9NS66 373 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 ACKR3P25106 362 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 G0S2P27469 103 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 SPEM2Q0P670 501 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 MISPQ8IVT2 679 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 SPACA9Q96E40 222 aaPredicted RBP13.35□□□□□ -0.27
PTBP1-203ENST00000356948 BSCL2Q96G97 398 aaPredicted RBP13.35□□□□□ -0.27
PTBP1-203ENST00000356948 SMCO4Q9NRQ5 59 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 SRPK3Q9UPE1 567 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 A0A0A6YYH2 397 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 A0A1W2PPE3 182 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 A6NJ64 397 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 CCDC85CA6NKD9 419 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 PATE3B3GLJ2 98 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 ZFAND5O76080 213 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 TPT1P13693 172 aaKnown RBP13.35□□□□□ -0.27
PTBP1-203ENST00000356948 AKR7LQ8NHP1 331 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 EDAQ92838 391 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 ZNF160Q9HCG1 818 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 UQCC1Q9NVA1 299 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 PIGLQ9Y2B2 252 aa13.35□□□□□ -0.27
PTBP1-203ENST00000356948 SCGB1D2O95969 90 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 ZNF345Q14585 488 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 RAET1LQ5VY80 246 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 WNT16Q9UBV4 365 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 RARRES3Q9UL19 164 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 MMP24Q9Y5R2 645 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 TNFSF11O14788 317 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 SMIM6P0DI80 62 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 F2RL1P55085 397 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 ENDOGQ14249 297 aaKnown RBP13.34□□□□□ -0.27
PTBP1-203ENST00000356948 TMEM128Q5BJH2 165 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 EIF4E3Q8N5X7 224 aaKnown RBP13.34□□□□□ -0.27
PTBP1-203ENST00000356948 OR5H2Q8NGV7 314 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 RHOFQ9HBH0 211 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 FLVCR1Q9Y5Y0 555 aa13.34□□□□□ -0.27
PTBP1-203ENST00000356948 PUS1Q9Y606 427 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTBP1-203ENST00000356948 A0A1W2PPH5 198 aa13.33□□□□□ -0.27
PTBP1-203ENST00000356948 RPS2P15880 293 aaKnown RBP13.33□□□□□ -0.27
PTBP1-203ENST00000356948 RPL7L1Q6DKI1 246 aaKnown RBP13.33□□□□□ -0.27
PTBP1-203ENST00000356948 GPHA2Q96T91 129 aa13.33□□□□□ -0.27
PTBP1-203ENST00000356948 FAAP24Q9BTP7 215 aa13.33□□□□□ -0.27
PTBP1-203ENST00000356948 OR10A2Q9H208 303 aa13.33□□□□□ -0.27
PTBP1-203ENST00000356948 UBE2ZQ9H832 354 aaPredicted RBP13.33□□□□□ -0.27
PTBP1-203ENST00000356948 PROK2Q9HC23 129 aa13.33□□□□□ -0.27
PTBP1-203ENST00000356948 C9JQL5 133 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 IGHV3-9P01782 118 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 SFTA3P0C7M3 94 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 PTGER4P35408 488 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 TAF9Q16594 264 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 FIP1L1Q6UN15 594 aaKnown RBP13.33□□□□□ -0.28
PTBP1-203ENST00000356948 ZNF565Q8N9K5 539 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 OR6X1Q8NH79 312 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 RNF141Q8WVD5 230 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 MEX3AA1L020 520 aaKnown RBP13.33□□□□□ -0.28
PTBP1-203ENST00000356948 HLA-GP17693 338 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 RPS18P62269 152 aaKnown RBP13.33□□□□□ -0.28
PTBP1-203ENST00000356948 KIAA0141Q14154 515 aaPredicted RBP13.33□□□□□ -0.28
PTBP1-203ENST00000356948 MST1LQ2TV78 715 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 TDHQ8IZJ6 230 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
PTBP1-203ENST00000356948 KCNG3Q8TAE7 436 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 DNASE2BQ8WZ79 361 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 POM121Q96HA1 1249 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 REEP6Q96HR9 211 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 OXGR1Q96P68 337 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 RFNGQ9Y644 331 aa13.33□□□□□ -0.28
PTBP1-203ENST00000356948 IGKV1-27A0A075B6S5 117 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 FAM230AA0A1W2PPH8 454 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 K7ESF4 209 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 DKK1O94907 266 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 FAM157CP0CG43 387 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 OR3A2P47893 321 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 COL19A1Q14993 1142 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 HIST3H3Q16695 136 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 Q3ZCU0 254 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 SLC23A3Q6PIS1 610 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 SSC4DQ8WTU2 575 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 PECRQ9BY49 303 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 SRXN1Q9BYN0 137 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 SFT2D2O95562 160 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 CASP6P55212 293 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 ACTBL2Q562R1 376 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 RABEPKQ7Z6M1 372 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 DTWD2Q8NBA8 298 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 FGFBP3Q8TAT2 258 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 SECTM1Q8WVN6 248 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 NCKAP5O14513 1909 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 AQP7P3A6NL99 342 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 NR2C1P13056 603 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 ASCL1P50553 236 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 RNF138Q8WVD3 245 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 NABP1Q96AH0 204 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 PLEK2Q9NYT0 353 aa13.32□□□□□ -0.28
PTBP1-203ENST00000356948 RIPPLY1Q0D2K3 151 aa13.31□□□□□ -0.28
PTBP1-203ENST00000356948 LPCAT3Q6P1A2 487 aa13.31□□□□□ -0.28
PTBP1-203ENST00000356948 PPP1R3BQ86XI6 285 aa13.31□□□□□ -0.28
PTBP1-203ENST00000356948 BAP18Q8IXM2 172 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms