RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 ZNF879B4DU55 563 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 ANKRD65E5RJM6 399 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 SIGLEC5O15389 551 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 ACAA1P09110 424 aaPredicted RBP16.9■□□□□ 0.3
CHRD-203ENST00000356534 PGA5P0DJD9 388 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 CAPGP40121 348 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 TGM4P49221 684 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 BPIFB3P59826 476 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 HILS1P60008 231 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 ADARB1P78563 741 aaKnown RBP16.9■□□□□ 0.3
CHRD-203ENST00000356534 IL24Q13007 206 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 METTL11BQ5VVY1 283 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 RBMS3Q6XE24 437 aaKnown RBP16.9■□□□□ 0.3
CHRD-203ENST00000356534 TMPRSS11AQ6ZMR5 421 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 BTN2A1Q7KYR7 527 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 FAM216BQ8N7L0 139 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 DNAAF1Q8NEP3 725 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 TRMT10AQ8TBZ6 339 aaKnown RBP16.9■□□□□ 0.3
CHRD-203ENST00000356534 SNTG1Q9NSN8 517 aa16.9■□□□□ 0.3
CHRD-203ENST00000356534 RPUSD1Q9UJJ7 312 aaKnown RBP16.9■□□□□ 0.3
CHRD-203ENST00000356534 TRAV40A0A0B4J280 105 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 FAM230AA0A1W2PPH8 454 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 A6NIN4 97 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 H3BSH0 61 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 NXPH2O95156 264 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 OCM2P0CE71 109 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 OCMP0CE72 109 aaPredicted RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 MYL12AP19105 171 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 PRKACBP22694 351 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 GABRA2P47869 451 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 ATP1B3P54709 279 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 CAV3P56539 151 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 NANOS3P60323 173 aaKnown RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 FGF12P61328 243 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 DMRTC1Q5HYR2 192 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 GPR157Q5UAW9 335 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 ACP7Q6ZNF0 438 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 CMTM4Q8IZR5 234 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 OR13C3Q8NGS6 347 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 CNIH3Q8TBE1 160 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 RNF166Q96A37 237 aaPredicted RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 SEH1LQ96EE3 360 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 GAFA1Q96PS6 74 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 SLC6A7Q99884 636 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 MS4A7Q9GZW8 240 aaPredicted RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 CHCHD3Q9NX63 227 aaKnown RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 SLC25A10Q9UBX3 287 aaPredicted RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 CAB39Q9Y376 341 aaPredicted RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 EXOSC1Q9Y3B2 195 aaKnown RBP16.89■□□□□ 0.29
CHRD-203ENST00000356534 KPTNQ9Y664 436 aa16.89■□□□□ 0.29
CHRD-203ENST00000356534 OR4C45A6NMZ5 311 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 TRIM77I1YAP6 450 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 CLIC3O95833 236 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 CYB5AP00167 134 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 PSG2P11465 335 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 ELF3P78545 371 aaPredicted RBP16.88■□□□□ 0.29
CHRD-203ENST00000356534 IKZF1Q13422 519 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 PDCD1Q15116 288 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 UBE2V2Q15819 145 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 SMN1Q16637 294 aaKnown RBP16.88■□□□□ 0.29
CHRD-203ENST00000356534 KRTAP24-1Q3LI83 254 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 KLF17Q5JT82 389 aaPredicted RBP16.88■□□□□ 0.29
CHRD-203ENST00000356534 LHFPL2Q6ZUX7 228 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 C9orf139Q6ZV77 190 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 Q8IYB0 196 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 OR5T2Q8NGG2 359 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 SPSB1Q96BD6 273 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 RASSF4Q9H2L5 321 aa16.88■□□□□ 0.29
CHRD-203ENST00000356534 ZMAT3Q9HA38 289 aaKnown RBP16.88■□□□□ 0.29
CHRD-203ENST00000356534 SLC1A7O00341 560 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 SYNGR1O43759 233 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 TOX4O94842 621 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 PLATP00750 562 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 RBP2P50120 134 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 SLC34A1Q06495 639 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 CCDC58Q4VC31 144 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 PHC2Q8IXK0 858 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 RDH10Q8IZV5 341 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 KIR3DL3Q8N743 410 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 OR5AK2Q8NH90 309 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 C8orf46Q8TAG6 207 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 NPRL2Q8WTW4 380 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 SDSLQ96GA7 329 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 WDFY2Q96P53 400 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 NRIP2Q9BQI9 281 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 ZNF649Q9BS31 505 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 PCGF1Q9BSM1 259 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 DCTN5Q9BTE1 182 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 CNTD2Q9H8S5 307 aa16.87■□□□□ 0.29
CHRD-203ENST00000356534 ISG20L2Q9H9L3 353 aaKnown RBP16.87■□□□□ 0.29
CHRD-203ENST00000356534 DIMT1Q9UNQ2 313 aaKnown RBP16.87■□□□□ 0.29
CHRD-203ENST00000356534 FBN1P35555 2871 aaKnown RBP16.87■□□□□ 0.29
CHRD-203ENST00000356534 IGKV1D-17A0A075B6S4 117 aa16.86■□□□□ 0.29
CHRD-203ENST00000356534 EFCAB10A6NFE3 127 aa16.86■□□□□ 0.29
CHRD-203ENST00000356534 LIMS3P0CW19 117 aa16.86■□□□□ 0.29
CHRD-203ENST00000356534 LIMS4P0CW20 117 aa16.86■□□□□ 0.29
CHRD-203ENST00000356534 PIPP12273 146 aaPredicted RBP16.86■□□□□ 0.29
CHRD-203ENST00000356534 ATF1P18846 271 aa16.86■□□□□ 0.29
CHRD-203ENST00000356534 AMY2BP19961 511 aa16.86■□□□□ 0.29
CHRD-203ENST00000356534 FIP1L1Q6UN15 594 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms