RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 RPP25Q9BUL9 199 aaKnown RBP14.34□□□□□ -0.11
NPHP3-201ENST00000337331 FAM221AA4D161 298 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 RNF222A6NCQ9 220 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 OGG1O15527 345 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 NXPH2O95156 264 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 CD74P04233 296 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 OR3A1P47881 315 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 CCR5P51681 352 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 HBG1P69891 147 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 HBG2P69892 147 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 IL10RAQ13651 578 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 PLXDC2Q6UX71 529 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 OR51H1Q8NH63 302 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 ROBO4Q8WZ75 1007 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 PGLYRP3Q96LB9 341 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 OR2A5Q96R48 311 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 ZNF2Q9BSG1 426 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-201ENST00000337331 LHX9Q9NQ69 397 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 PARP11Q9NR21 331 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 SLC39A9Q9NUM3 307 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-201ENST00000337331 CCDC187A0A096LP49 1063 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 SLC17A2O00624 439 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 THEM4Q5T1C6 240 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 VN1R4Q7Z5H5 301 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 BAGE3Q86Y29 109 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
NPHP3-201ENST00000337331 SCN3AQ9NY46 2000 aa14.33□□□□□ -0.11
NPHP3-201ENST00000337331 TGIF2-C20orf24A0A0A6YYL0 155 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 TRGC1P0CF51 173 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 LCN15Q6UWW0 184 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 C22orf15Q8WYQ4 148 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 PRRX2Q99811 253 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 RAB9BQ9NP90 201 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 DTX4Q9Y2E6 619 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 A8MXE2 369 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 MBPP02686 304 aaPredicted RBP14.33□□□□□ -0.12
NPHP3-201ENST00000337331 MAJINQ3KP22 176 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 VHLLQ6RSH7 139 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 MMP25Q9NPA2 562 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 HAO2Q9NYQ3 351 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 SLCO1B1Q9Y6L6 691 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 ZDBF2Q9HCK1 2354 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 ARPC3O15145 178 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 LINC01565O15544 149 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 ECI1P42126 302 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 NUTF2P61970 127 aaKnown RBP14.33□□□□□ -0.12
NPHP3-201ENST00000337331 SSBP1Q04837 148 aaKnown RBP14.33□□□□□ -0.12
NPHP3-201ENST00000337331 ARRDC1Q8N5I2 433 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 ANKRD9Q96BM1 317 aaPredicted RBP14.33□□□□□ -0.12
NPHP3-201ENST00000337331 OR8B4Q96RC9 309 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 FLVCR1Q9Y5Y0 555 aa14.33□□□□□ -0.12
NPHP3-201ENST00000337331 TMEM272A0A1B0GTI8 110 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 DRD3P35462 400 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 GFI1BQ5VTD9 330 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 UBE3DQ7Z6J8 389 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 CARFQ8N187 725 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 ADAD2Q8NCV1 583 aaKnown RBP14.32□□□□□ -0.12
NPHP3-201ENST00000337331 OR5AC2Q9NZP5 309 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 MRPS2Q9Y399 296 aaKnown RBP14.32□□□□□ -0.12
NPHP3-201ENST00000337331 EP400Q96L91 3159 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 CACNA1DQ01668 2161 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 HSPB2A8KAH6 182 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 AGAP20933 346 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 ARL3P36405 182 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 STARD6P59095 220 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 HSPB2Q16082 182 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 DRAM2Q6UX65 266 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 SLC38A9Q8NBW4 561 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 DMBX1Q8NFW5 382 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 NDUFAF3Q9BU61 184 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 FOXQ1Q9C009 403 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 PBOV1Q9GZY1 135 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 MOB1AQ9H8S9 216 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 ST6GALNAC2Q9UJ37 374 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 LIPGQ9Y5X9 500 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 DOCK1Q14185 1865 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 TRAV8-7A0A075B6U6 113 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 OR2J2O76002 312 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 IGHEP01854 428 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 HPNP05981 417 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 FKBP2P26885 142 aaKnown RBP14.32□□□□□ -0.12
NPHP3-201ENST00000337331 NKX2-1P43699 371 aaPredicted RBP14.32□□□□□ -0.12
NPHP3-201ENST00000337331 C21orf58P58505 322 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 EXT1Q16394 746 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 TCTN1Q2MV58 587 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 KCNIP4Q6PIL6 250 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 VAMP8Q9BV40 100 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 FKBP11Q9NYL4 201 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 RNF212BA8MTL3 300 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 TMEM229AB2RXF0 380 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 TUSC2O75896 110 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 PDGFBP01127 241 aaPredicted RBP14.32□□□□□ -0.12
NPHP3-201ENST00000337331 GABRG2P18507 467 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 OTOSQ8NHW6 89 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 DUSP13Q9UII6 198 aa14.32□□□□□ -0.12
NPHP3-201ENST00000337331 FRG2CA6NGY1 282 aa14.31□□□□□ -0.12
NPHP3-201ENST00000337331 MPPED1O15442 326 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms