RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ASB5Q8WWX0 329 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 CPNE2Q96FN4 548 aaPredicted RBP13.83□□□□□ -0.2
PDGFB-201ENST00000331163 SEC22AQ96IW7 307 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 OR2H1Q9GZK4 316 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 MSL2Q9HCI7 577 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 PIPOXQ9P0Z9 390 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 IFITM5A6NNB3 132 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 TIMM8AO60220 97 aaPredicted RBP13.83□□□□□ -0.2
PDGFB-201ENST00000331163 CYB5AP00167 134 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 F12P00748 615 aaPredicted RBP13.83□□□□□ -0.2
PDGFB-201ENST00000331163 P2RY4P51582 365 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 GUCA2AQ02747 115 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 TAF9Q16594 264 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 DEFB108BQ8NET1 73 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 SEMA6DQ8NFY4 1073 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 STARD10Q9Y365 291 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF175Q9Y473 711 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 PLSCR5A0PG75 271 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 TMEM235A6NFC5 223 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 GPR31O00270 319 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 ANOS1P23352 680 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 AP3S2P59780 193 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 ENDOGQ14249 297 aaKnown RBP13.83□□□□□ -0.2
PDGFB-201ENST00000331163 C2orf76Q3KRA6 126 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 LIN54Q6MZP7 749 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 EDARQ9UNE0 448 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 MRPS28Q9Y2Q9 187 aaKnown RBP13.83□□□□□ -0.2
PDGFB-201ENST00000331163 GCH1P30793 250 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 GPM6AP51674 278 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 PLA2G7Q13093 441 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 RNF144BQ7Z419 303 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 TPRA1Q86W33 373 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 CBLN2Q8IUK8 224 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 TMEM123Q8N131 208 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 SCPEP1Q9HB40 452 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 RBM7Q9Y580 266 aaKnown RBP13.82□□□□□ -0.2
PDGFB-201ENST00000331163 F5H5P2 479 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 CCSO14618 274 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 PPP3CBP16298 524 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 PTGER4P35408 488 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 MRPS34P82930 218 aaKnown RBP13.82□□□□□ -0.2
PDGFB-201ENST00000331163 TMEM231Q9H6L2 316 aa13.82□□□□□ -0.2
PDGFB-201ENST00000331163 PROB1E7EW31 1015 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 AIPO00170 330 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 KCNAB3O43448 404 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 GTF2F2P13984 249 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 OR3A4PP47883 348 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 EFNB2P52799 333 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF92Q03936 586 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 CPEB3Q8NE35 698 aaKnown RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 OR1M1Q8NGA1 313 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 ACKR4Q9NPB9 350 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 DNAJB11Q9UBS4 358 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 DOPEY2Q9Y3R5 2298 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 METTL21EPA6NDL7 271 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 GABRA1P14867 456 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 CDK2P24941 298 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 H2BFSP57053 126 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 BPIFCQ8NFQ6 507 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 SYT3Q9BQG1 590 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 NKX6-2Q9C056 277 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 OR2J1Q9GZK6 312 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 ARPC4-TTLL3A0A0A6YYG9 625 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 K7ENP7 123 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 OGG1O15527 345 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 B3GALNT1O75752 331 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 PVALBP20472 110 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 INO80CQ6PI98 192 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 TFAP2EQ6VUC0 442 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 GLDNQ6ZMI3 551 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 SLC25A26Q70HW3 274 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 PXT1Q8NFP0 134 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 OR4D10Q8NGI6 311 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 OR1S1Q8NH92 325 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 LILRB1Q8NHL6 650 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 SLC25A28Q96A46 364 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 MRPS24Q96EL2 167 aaKnown RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 PRELID3BQ9Y3B1 194 aa13.81□□□□□ -0.2
PDGFB-201ENST00000331163 TNRC6BQ9UPQ9 1833 aaKnown RBP13.81□□□□□ -0.2
PDGFB-201ENST00000331163 ANKRD30BLA7E2S9 258 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF254O75437 659 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 APOC1P02654 83 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 GIPP09681 153 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-201ENST00000331163 GLI4P10075 376 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 GAAP10253 952 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 HAAOP46952 286 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 RIPPLY1Q0D2K3 151 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 GGTLC2Q14390 218 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 TBC1D28Q2M2D7 210 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 FAM27BQ5VT28 67 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 SEZ6L2Q6UXD5 910 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 CATSPERDQ86XM0 798 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ABCA1O95477 2261 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ZNF432O94892 652 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ECDO95905 644 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-201ENST00000331163 NRASP01111 189 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 IFNA6P05013 189 aa13.8□□□□□ -0.2
PDGFB-201ENST00000331163 ADRA2CP18825 462 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms